Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0156 ATGGCTGTAGCTTCAAGATTCATGTGCACAACTCTTACTCATCATGGTTTTAGCTCAACAACACATAGAACCCATCTGGGTCATGCTCAGTTAACTCTTTCTTCACGCAAGAATCAAAATTTTCACTGTTCAGTTTCTGCAAGTGATGCCACAAAAACCTCCTCAGTGAAGGAAACCATTATTCCATGGGGCTGTGATATTGATTCAGTAGAAAATGCATCAGCTTTGCAGAAATGGTTGTCAGATTCAGGCCTTCCAGCACAGAAGATGGGAATTGAAAGAGTTGATGTTGGAGAGAGAGGACTTGTTGCATTGAAGAATATAAGGAAAGGGGAGAAGCTTCTCTTTGTTCCTCCCTCATTAGTCATAACTGCAGATTCTGAGTGGAGTTCTCCGGAAGCCGGTGAAGTATTGAAAAGGAATTCAGTGCCCGATTGGCCACTGATTGCAACTTACCTCATAAGTGAAGCTAGCCGCATGAAATCTTCTAGATGGAGCAATTATATATCAGCCTTACCTCGGCAACCTTACTCACTTCTTTACTGGTCACAAGCAGAACTAGATCGCTACTTGGAAGCTTCGCAGATTAGAGAGAGAGCAATTGAAAGGATTAACAATGTGGTTGGAACATACAATGATTTGAGGCTGAGAATATTTTCCAAATACCCTGATTTATTCCCGGAAGAGGTGTTCAACATAGACTCCTTCATATGGTCATTCGGCATTCTTTTTTCTCGCTTGGTTCGGTTACCCTCCATGGATGGAAAGGTTGCCTTGGTTCCTTGGGCAGATATGCTGAATCATAGTTGTGATGTGGGGACATATTTGGATTATGATAAATCGTCGAAGGGAATTGTTTTTACGACAGATCGAGTCTATCAACCAGGTGAGCAGGTGTTTATTTCATATGGAAAAAAATCAAACGGAGAGCTTCTGTTATCTTATGGATTTGTTCCAAGGGAAGGTGCTAATCCTAGTGATTCAGTTGAGTTGGCACTGTCACTCGAGAAATCTGATGAGTCCTATGAGCAGAAGTCGGAACTCTTGAAGAAGTATGGTTTATCAGAATCACAGTGTTTTCCTATACAGATTACTGGTTGGCCATTGGAGTTGATGGCTTATGCTTATTTAGCTGTTAGTCCTTCAAGCTTGAGTGGGAAATTTGAAGAGATGGCCGCTGCAGCATCAAATAAAATTACAAACAAGAAGGATATTCGGTATCCTGAAATAGAGGAACAAGCATTACAGTTCATACTTGATAGCTGTGAATCCAGTATATCAAAATACAACAAGTTCTTGCAGGTAAGTGGATCACTGGATTTGGATGTGACTTCTCCAAAACAGCTCAATAGAAGACTCTTTCTGAAACAGCTAGCTGTGGACTTGTGTAATAGCGAGCGAAGGATATTGTTTCGTGCTCAATATATATTGCGAAGGAGAGTGAGGGATATGAGATCTGGCGAATTAAGAGCTCTAAAAATCTTTGACGGGTTTCGGAATCTTTTCCAATGA 1512 0.4107 MAVASRFMCTTLTHHGFSSTTHRTHLGHAQLTLSSRKNQNFHCSVSASDATKTSSVKETIIPWGCDIDSVENASALQKWLSDSGLPAQKMGIERVDVGERGLVALKNIRKGEKLLFVPPSLVITADSEWSSPEAGEVLKRNSVPDWPLIATYLISEASRMKSSRWSNYISALPRQPYSLLYWSQAELDRYLEASQIRERAIERINNVVGTYNDLRLRIFSKYPDLFPEEVFNIDSFIWSFGILFSRLVRLPSMDGKVALVPWADMLNHSCDVGTYLDYDKSSKGIVFTTDRVYQPGEQVFISYGKKSNGELLLSYGFVPREGANPSDSVELALSLEKSDESYEQKSELLKKYGLSESQCFPIQITGWPLELMAYAYLAVSPSSLSGKFEEMAAAASNKITNKKDIRYPEIEEQALQFILDSCESSISKYNKFLQVSGSLDLDVTSPKQLNRRLFLKQLAVDLCNSERRILFRAQYILRRRVRDMRSGELRALKIFDGFRNLFQ* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0156 503 CDD SET_RBCMT 83 318 IPR044431 GO:0016279|GO:0018022
Lan2g0156 503 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 334 500 IPR036464 -
Lan2g0156 503 Pfam Rubisco LSMT substrate-binding 337 470 IPR015353 -
Lan2g0156 503 PANTHER - 21 298 - -
Lan2g0156 503 PIRSF RMT_SET 1 500 IPR011192 GO:0009507|GO:0030785
Lan2g0156 503 Gene3D set domain protein methyltransferase, domain 1 28 317 - -
Lan2g0156 503 Gene3D - 323 492 IPR036464 -
Lan2g0156 503 ProSiteProfiles SET domain profile. 88 304 IPR001214 GO:0005515
Lan2g0156 503 SMART set_7 88 310 IPR001214 GO:0005515
Lan2g0156 503 Pfam SET domain 100 304 IPR001214 GO:0005515
Lan2g0156 503 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 21 298 - -
Lan2g0156 503 SUPERFAMILY SET domain 72 320 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0156 Lan-Chr2 1324428 1330500 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan2g0156 SET 2.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0156 - - gmx:100803319 828.165