Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0127 ATGGGTCTTAGTTTGAAGATGCAAAGCTACAATCCTGTGGCTTTGAGGTTGCATGATCAAATGGGGTCTAAAAGAAAGTACACTTTCATTCAGGCACATAGAGCTTGGCTTCCAAAGTTTTTGCTCCTATGGATCCTTCTAATGGCTATAATAAGTTGGTGGATCTATAATAAAATGGATGATGACACCAAAATCAGAAGGAAAGAAGTGTTGGGTAGTCTCTGTGATCAAAGGGCAAGAATGTTGCAAGATCAGTTTAGTGTTAGTGTTAACCATGTTCATGCTCTTGCCATCCTTGTTTCAACCTTCCATTATTATAGATACCCTTCTGCAATTGACCAGGAAACCTTTGCTGAGTATACAGCTAGGACAGCATTTGAAAGGCCATTGCTGAGTGGTGTGGCCTATGCACAAAGAGTTGTTGATTCAGAGAGAGAAAGATTTGAGAATCAACATGGATGGGTCATAAAGACAATGGAAAGAGTGTCTTCACTTGTTAGAGATGAGTATGCACCAGTTATATTTGTGCAAGAAACCTTATCATACCTCGAATCTATCGATATGATGTCCGGGGAGGAAGACCGAGAAAACATTTTGAGGGCAAGGGCCACTGGGAAAGCAGTTCTGACTAGCCCTTTCAGGTTGTTGGGTTCTCATCATCTTGGTGTGGTATTAACATTCCCTGTTTACAAATATAAGCTCCCTCCGAAGCCAACAGTGGAAGAACGAGTTGAAGCAACTGCAGGATATGTGGGAGGATCTTTTGATGTTGAATCCCTTGTGGAGAATTTACTTGGGCAACTTGCTGGTCACCAAGCAATTTTGGTGAATGTATATGATATCACCAACTACACCAATCCCTTAATCATGTACGGTAACCAATACGAAGAAGGCGATATGTCTCTTGCCCATGAAAGCGCCCTAGATTTTGGAGATCCATTCAGGAAACATCAGATGATATGCAGGTATCATCAGAAGGCGCCGATAAATTGGACAGCACTTACCACGGCGTTCCTATTCTTTGTGATTCTTTTATTAGTCGGCTACATTTTATACGGTGCTGGAAATCATATTATCAAAGTTGAGGATGATTTCCATGAAATGCAGGAATTAAAAGTCCGGGCAGAAGCAGCTGATGTTGCCAAGTCCCAGTTTCTAGCTACTGTATCTCATGAAATTAGAACACCAATGAATGGCATTTTAGGAATGCTTGCTCTGCTTCTAGATACAGAGTTGAGTTCAACTCAGAGAGATTATGGTCAGACTGCTCAAGCATGTGGAAAGGCACTGATAACTTTGATAAACGAGGTGCTCGACCGAGCTAAAATTGAAGCTGGCAAGTTAGAGCTGGAGGCAGTTCCATTCGACCTTCGATCTATACTTGATGATGTCCTTTCTCTTTTTTCTGAGAAGTCTAGGCACAAAGGTTTAGAGCTGGCAGTTTTTGTCGCAGATGAAGTTCCTGATATCGTTATGGGAGATCCTGGGAGATTCAGACAAATAATAACAAATCTTGTTGGTAACTCTGTTAAATTTACTGAACAAGGACATATATTTGTTAAAGTCCACCTTGCAGAAAGTAGGAAGTCCACAATGCACGGAAAACATGAGCCATTTGTAAATGGAGGATCTGATGAAGTTGTTCATATTTCTGGTGGTTATCATTTTAAAACCTTAAGTGGATGCGAAGCAGCCGATGAACAGAACACCTGGGATAATTTTAAGCATCTACTTGCTGATGAATCCTCGAGTAAAATAGCAGCCTTGTGTGAATTTTCCGAGCAAGTCGCCTTGAGGGTCTGTGTAGAGGACACTGGAATTGGAATTCCTTTCTCAGCACAGGATACGATATTCATGCCTTTTGTGCAGGCAGACAGCTCGACCTCGAGAAATTATGGCGGTACTGGTATTGGTTTAAGTATCAGTAAATGTCTGGTGGAATTAATGGGAGGTCAGATAAATTTCATAAGCCAACCTCAGGTTGGCAGCACATTTTCGTTTACTGCGGTTTTCGGAACATTTAAGAAAAAAATGGTTAATGACACAAAGAAAGTTAACTTGGAAGAACTTCCTTCAAGTTGTAGAGGGCTTAAAGCCATAGTGGTTGATGGAAAACCTGTTAGAGCTGCTGTGACAAGATACCATTTGAAGAGACTAGGGATACTAGTTAAAGTTGCCAATAGCATCAATACGGCAGTTACTTTATCTAGGAAAAATGGTTCTATTACATCGGAGTTATTCCAGCCGGATATTATTTTGGTTGAGAAGGATTCATGGATTTCTGGATTGGATGTGAGCTTCGATGTAAGGAAACTAGATCGAAAACAGAACGGGCATATGTTTAAGATGCGTAAATTGATCCTTCTGGCAACCAATATGAGTAATACTGAATTTGATAAAGCGAAGGCCTCAGGTTTTACTGATACAGTGATCATGAAGCCTCTGAGAGCTAGTATGATCGCTGCATGTCTTCAGCAAGTTCTCGGCGTGGGGAAGAAGAGGCAGGTAGGTAAAGACATGCCTGATGGTTCTGCTTTTCTACAAAGCCTTCTCTATGGAAAGAAAATCTTGGTGGTCGATGATAATATGGTGAACCGGCGGGTCGCTGCAGGCGCATTAAAAAAGTTTGGAGCCGATGTGAAGTGTGCTGAAAGTGGCAAAGCTGCACTTGAAATCCTTCAGTTACCTCACAATTTTGATGCTTGCTTTATGGACATTCAAATGCCAGAAATGGATGGATTCGAAGCAACTAGTCGAATTCGGATGATGGAAAGCACGGCGAATGAGCAGATGAATGGTGAAGGAAATGGCAGAACAAGTAAGTGGCATATACCAATATTAGCCATGACAGCTGATGTTATACATGCAACATCAGATAAGTGTTTGAAATGTGGTATGGATGGATATGTCTCAAAGCCATTTGAGGAAGAAAATCTCTATAAAGAAGTTGCAAAGTTTTTCAAATCCAAGTCTATCTAA 2979 0.4112 MGLSLKMQSYNPVALRLHDQMGSKRKYTFIQAHRAWLPKFLLLWILLMAIISWWIYNKMDDDTKIRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRYPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVDSERERFENQHGWVIKTMERVSSLVRDEYAPVIFVQETLSYLESIDMMSGEEDRENILRARATGKAVLTSPFRLLGSHHLGVVLTFPVYKYKLPPKPTVEERVEATAGYVGGSFDVESLVENLLGQLAGHQAILVNVYDITNYTNPLIMYGNQYEEGDMSLAHESALDFGDPFRKHQMICRYHQKAPINWTALTTAFLFFVILLLVGYILYGAGNHIIKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTELSSTQRDYGQTAQACGKALITLINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVADEVPDIVMGDPGRFRQIITNLVGNSVKFTEQGHIFVKVHLAESRKSTMHGKHEPFVNGGSDEVVHISGGYHFKTLSGCEAADEQNTWDNFKHLLADESSSKIAALCEFSEQVALRVCVEDTGIGIPFSAQDTIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGQINFISQPQVGSTFSFTAVFGTFKKKMVNDTKKVNLEELPSSCRGLKAIVVDGKPVRAAVTRYHLKRLGILVKVANSINTAVTLSRKNGSITSELFQPDIILVEKDSWISGLDVSFDVRKLDRKQNGHMFKMRKLILLATNMSNTEFDKAKASGFTDTVIMKPLRASMIAACLQQVLGVGKKRQVGKDMPDGSAFLQSLLYGKKILVVDDNMVNRRVAAGALKKFGADVKCAESGKAALEILQLPHNFDACFMDIQMPEMDGFEATSRIRMMESTANEQMNGEGNGRTSKWHIPILAMTADVIHATSDKCLKCGMDGYVSKPFEEENLYKEVAKFFKSKSI* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0127 992 Gene3D - 849 992 - -
Lan2g0127 992 SUPERFAMILY CheY-like 694 829 IPR011006 -
Lan2g0127 992 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 435 668 IPR036890 -
Lan2g0127 992 Gene3D CHASE domain 112 327 IPR042240 -
Lan2g0127 992 Gene3D - 445 674 IPR036890 -
Lan2g0127 992 SMART REC_2 854 983 IPR001789 GO:0000160
Lan2g0127 992 SMART CHASE_2 108 293 IPR006189 -
Lan2g0127 992 CDD REC_hyHK_CKI1_RcsC-like 856 983 - -
Lan2g0127 992 CDD HisKA 381 442 IPR003661 GO:0000155|GO:0007165
Lan2g0127 992 Gene3D - 59 111 - -
Lan2g0127 992 CDD HATPase_EvgS-ArcB-TorS-like 498 671 - -
Lan2g0127 992 Pfam His Kinase A (phospho-acceptor) domain 381 446 IPR003661 GO:0000155|GO:0007165
Lan2g0127 992 SMART HisKA_10 381 446 IPR003661 GO:0000155|GO:0007165
Lan2g0127 992 ProSiteProfiles Response regulatory domain profile. 855 987 IPR001789 GO:0000160
Lan2g0127 992 PANTHER TWO-COMPONENT HISTIDINE KINASE 22 990 - -
Lan2g0127 992 SMART HKATPase_4 493 673 IPR003594 -
Lan2g0127 992 ProSiteProfiles Histidine kinase domain profile. 388 673 IPR005467 -
Lan2g0127 992 ProSiteProfiles CHASE domain profile. 108 320 IPR006189 -
Lan2g0127 992 PANTHER HISTIDINE KINASE 4 22 990 - -
Lan2g0127 992 Pfam CHASE domain 111 291 IPR006189 -
Lan2g0127 992 Pfam Response regulator receiver domain 856 983 IPR001789 GO:0000160
Lan2g0127 992 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 493 670 IPR003594 -
Lan2g0127 992 SUPERFAMILY CheY-like 853 987 IPR011006 -
Lan2g0127 992 Gene3D - 356 444 - -
Lan2g0127 992 Gene3D - 675 830 - -
Lan2g0127 992 PRINTS Bacterial sensor protein C-terminal signature 598 612 IPR004358 GO:0016310|GO:0016772
Lan2g0127 992 PRINTS Bacterial sensor protein C-terminal signature 616 626 IPR004358 GO:0016310|GO:0016772
Lan2g0127 992 PRINTS Bacterial sensor protein C-terminal signature 633 651 IPR004358 GO:0016310|GO:0016772
Lan2g0127 992 PRINTS Bacterial sensor protein C-terminal signature 657 670 IPR004358 GO:0016310|GO:0016772
Lan2g0127 992 ProSiteProfiles Response regulatory domain profile. 698 828 IPR001789 GO:0000160
Lan2g0127 992 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 367 447 IPR036097 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0127 Lan-Chr2 1086551 1093108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0127 19 992 Histidine Kinase Gene Family AT2G01830 72.081 0.0 1403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan2g0127 CHASE 1.3e-36 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0127 K14489 - gmx:100813204 1701.41