Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0123 ATGACCAAGCAGACATGGAAATCACATGACCCCACTGATTTCATGATTCAACACAGTGATCTTGAAAAATCCTGCGAGTTTGAGTTTAGAGCAGGAAACATTGTGGAGTCATGCAACTTTATGATCGAGATCGCGATTTGGTGGTCAGTGGGCTTTTACTTGGTTGTCTCTGGTGGTGATTTACTTATGCAAGATGCCCCGCGTTTTTACCGGTTGGGTGTTGTCTTTCTGGGATTTGATGTTTTCTTTGTGATCTTGTGTGTTCTTTTGGCATGCTTGATTGGCATTGCCGTCTGTTGTTCTTTTCCGTGCATCTTCGCTTTTCTCTATGCTCTTGCATTACAGGAAGCTGCGTCCGATGCAAATCTTATTATACTTCCAAGATACAGATTTCGAATATTAAGCAACGACGAAAAGGCTACTACGGGAGCTGGAGCAATGTTTCCCATAGAAAATGGCAGTGGTTACTTAGCAAAGGAAAGAATACTTTTACCAGAGGATATGGAATGCTGCATATGCCTCTGTTCATATGAGAATGGAGAAGAGCTTCATGCTCTTCCTTGCAACCATCATTTCCATTCTGCATGCATATTGAAATGGCTAAAGATGAATGCAATTTGTCCTCTTTGCAAGTACAATATTCTCAAGGGAAATAAACACTTGTAA 666 0.4114 MTKQTWKSHDPTDFMIQHSDLEKSCEFEFRAGNIVESCNFMIEIAIWWSVGFYLVVSGGDLLMQDAPRFYRLGVVFLGFDVFFVILCVLLACLIGIAVCCSFPCIFAFLYALALQEAASDANLIILPRYRFRILSNDEKATTGAGAMFPIENGSGYLAKERILLPEDMECCICLCSYENGEELHALPCNHHFHSACILKWLKMNAICPLCKYNILKGNKHL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0123 221 SUPERFAMILY RING/U-box 158 215 - -
Lan2g0123 221 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 155 219 IPR013083 -
Lan2g0123 221 Pfam Ring finger domain 169 211 IPR001841 -
Lan2g0123 221 PANTHER TARGET OF ERK KINASE MPK-1 35 219 - -
Lan2g0123 221 SMART ring_2 170 210 IPR001841 -
Lan2g0123 221 ProSiteProfiles Zinc finger RING-type profile. 170 211 IPR001841 -
Lan2g0123 221 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 35 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0123 Lan-Chr2 1046474 1049864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0123 17 220 C3H Transcription Factor Family AT1G68070 60.294 6.01e-86 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0123 - K13148 lang:109330573 464.151