Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0112 ATGGCTATGTTGTACTCTTTTATTCCTATGGCTTTCTACATGGCTCTTTTGGTTCCATCCATATCAGGTCGCATTGACCAACATTGGTATAATGCTACTGCAACATTCTATGGAGACATGAATGGTGGTGAAACCATGCAAGGTGCTTGTGGCTATGGTAATCTCTTCAAACAAGGGTATGGTCTTGAAACCACAGCACTAAGCACTGCTCTATTCAACGAAGGACTTGCATGTGGTTCCTGTTATGAAATCAAGTGTATCAATGAACCTGGATGGGAATTTTGCGTAAAGAATGCACGTTCCATCAAAGTCACTGCAACAAACTTTTGTCCTCCAAATTATGTCGATGGTGGTTGGTGCAACCCTCCACAAAAGCACTTTGATCTATCAATGAAAATGTTTACCACTATTGCTTTGTACAGAGCAGGAATAGTTTCAGTAAATTATCGTCGCGTTCCATGCATCAAAAAAGATGGTGTTAAATTTGAGCTCACAGGGAACCCTTATTGGTTACTAGTATTGGTGTATAATGTGGCCAATGCAGGTGATATCAAAAGTGTGAGTATCAAAGGGTCTAAAAGTGGCTGGTTTCCTATGACACATAACTGGGGACAACATTGGAATACAGGTCAAAATTTAGTAGGACAAACATTGTCATTTCAAGTGACTACTAGTGATGGAAAAATGTTACAGTTTGATAATGTTGTTCCTGCAAATTGGAAATTTGGAGGGACATATCAGAGTAAACAAAATTTTTAG 759 0.39 MAMLYSFIPMAFYMALLVPSISGRIDQHWYNATATFYGDMNGGETMQGACGYGNLFKQGYGLETTALSTALFNEGLACGSCYEIKCINEPGWEFCVKNARSIKVTATNFCPPNYVDGGWCNPPQKHFDLSMKMFTTIALYRAGIVSVNYRRVPCIKKDGVKFELTGNPYWLLVLVYNVANAGDIKSVSIKGSKSGWFPMTHNWGQHWNTGQNLVGQTLSFQVTTSDGKMLQFDNVVPANWKFGGTYQSKQNF* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0112 252 Gene3D - 19 154 IPR036908 -
Lan2g0112 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 169 248 IPR007117 -
Lan2g0112 252 Gene3D - 159 252 IPR036749 -
Lan2g0112 252 SUPERFAMILY Barwin-like endoglucanases 28 177 IPR036908 -
Lan2g0112 252 Pfam Expansin C-terminal domain 160 237 IPR007117 -
Lan2g0112 252 PANTHER EXPANSIN-A15 14 252 IPR002963 GO:0009664
Lan2g0112 252 PRINTS Expansin signature 59 73 IPR002963 GO:0009664
Lan2g0112 252 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Lan2g0112 252 PRINTS Expansin signature 117 134 IPR002963 GO:0009664
Lan2g0112 252 PRINTS Expansin signature 134 147 IPR002963 GO:0009664
Lan2g0112 252 PRINTS Expansin signature 158 170 IPR002963 GO:0009664
Lan2g0112 252 PRINTS Expansin signature 170 191 IPR002963 GO:0009664
Lan2g0112 252 PRINTS Expansin signature 205 226 IPR002963 GO:0009664
Lan2g0112 252 PRINTS Expansin signature 234 250 IPR002963 GO:0009664
Lan2g0112 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 159 IPR007112 -
Lan2g0112 252 SUPERFAMILY PHL pollen allergen 158 248 IPR036749 -
Lan2g0112 252 SMART dpbb_1 64 149 IPR007112 -
Lan2g0112 252 PRINTS Expansin/Lol pI family signature 28 43 IPR007118 GO:0005576
Lan2g0112 252 PRINTS Expansin/Lol pI family signature 46 64 IPR007118 GO:0005576
Lan2g0112 252 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Lan2g0112 252 PRINTS Expansin/Lol pI family signature 142 158 IPR007118 GO:0005576
Lan2g0112 252 PRINTS Expansin/Lol pI family signature 196 210 IPR007118 GO:0005576
Lan2g0112 252 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Lan2g0112 252 Pfam Lytic transglycolase 64 149 IPR009009 -
Lan2g0112 252 PANTHER EXPANSIN-A21-RELATED 14 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0112 Lan-Chr2 967039 968008 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0112 25 252 Expansin Gene Family AT5G39280 62.609 1.48e-106 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0112 - - cam:101510232 363.999