Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0084 ATGTTTAAGAGAAGACACACCCTTTGTTCTCTTTTAAGGGAATTGTTTCTTTTGTTATTGTTCAGCTTGCACCATAGCACAGTGCAATGCCAAGGAAGGTTGAGTAAGCATGTTTCTTCAGCCCCATATTCACCTTCAGAATACAAGGATGACCTTAGGAGAATCATTATTAGCATAGTTTTAGGAGGATTAACCGGTCTAGTTGGTTCTGTTTTCTTCGCATTTGTGGTTCGTTGTGTTGTTCGATATCTTAACCGGACACCAATCCTCAAGGGTCCTGTCATATTTTCCCCAAAAATTGCACCCAAGACACTTGAATCAGCTTTGGCAAAAGAAAACCATTTGCTTGGTTCGAGTCCGAACGGGAAATACTACAAAACCGTGCTTGACAATGGCCTTACAATTGCAGTCAAAAGACTAACACCCTTTGAGAGCAATTCGCCCGAGATGAGGAGGAAATCGGTGAAGAGGCAGATACAGAAGGAGCTAGAGCTTCTTGCCAGTCTAAGGCATAGGAACTTGATGAGCTTGAGGGCTTATGTTCGCGAAGCCGATAGGTTCTCGCTGGTTTATGATTACGTATCCACGGGGAGTCTTGCAGATTTGATGAATAGAGTGAGGGAAAATGAGTTGCAGCTTGGTTGGGAAGTTAGACTAAGGATTGCTGTTGGTATTGTGAAGGGTCTTCAGTATCTTCATTTCACTTGTGTGCCTCAGATTCTGCATTGCAACTTGAAGCCGACAAATGTGATGTTAGATGCCGAGTTTGAACCCAGATTGGCAGATTATGGATTGAGCAAACTTCTACCAAACTTGGATAGAGGAACACATGGCAACAACCCTTCTCAGTCTTTACATAATTGCAGGTACACAGACAAAAGTGACATTTTCAGTTTTGGCATGATACTTGGCACTTTGTTAACTGGTAAGGATCCAACAGATCCATTCTTCGGAGAAGCGGCGAGTGGAGGAAGTTTGGGAAGTTGGCTGCAACACTTGCAGCGAGCCGGCGAGGCACGGGAAGCTCTAGATAAGAGTATTCTTGGAGAAGAAGGGGAGGAAGATGAGATGCTAATGGCTGTTAGGATTGCTGCTGCATGCTTATCTGACATCCCTGCTGATAGGCCTTCAAGTGATGAACTTGTTCACATGCTAACACAATTGCACAGCTTTTGA 1176 0.4396 MFKRRHTLCSLLRELFLLLLFSLHHSTVQCQGRLSKHVSSAPYSPSEYKDDLRRIIISIVLGGLTGLVGSVFFAFVVRCVVRYLNRTPILKGPVIFSPKIAPKTLESALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFESNSPEMRRKSVKRQIQKELELLASLRHRNLMSLRAYVREADRFSLVYDYVSTGSLADLMNRVRENELQLGWEVRLRIAVGIVKGLQYLHFTCVPQILHCNLKPTNVMLDAEFEPRLADYGLSKLLPNLDRGTHGNNPSQSLHNCRYTDKSDIFSFGMILGTLLTGKDPTDPFFGEAASGGSLGSWLQHLQRAGEAREALDKSILGEEGEEDEMLMAVRIAAACLSDIPADRPSSDELVHMLTQLHSF* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0084 391 Pfam Protein kinase domain 112 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0084 391 ProSiteProfiles Protein kinase domain profile. 110 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0084 391 SUPERFAMILY Protein kinase-like (PK-like) 113 385 IPR011009 -
Lan2g0084 391 CDD STKc_IRAK 116 388 - -
Lan2g0084 391 PANTHER - 11 391 - -
Lan2g0084 391 Coils Coil 152 172 - -
Lan2g0084 391 Gene3D Phosphorylase Kinase; domain 1 98 193 - -
Lan2g0084 391 Gene3D Transferase(Phosphotransferase) domain 1 194 390 - -
Lan2g0084 391 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 11 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0084 Lan-Chr2 780057 782865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0084 56 388 Receptor kinase-like Gene Family AT2G31880 33.051 2.49e-57 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Lan2g0084 Pkinase 1.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0084 - - gmx:102664172 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0073 9 539458 542373 Lan2g0084 2 780057 782865 LSH