Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0078 ATGACTCAGGCTGTGGAGGTTTTGAATCGTTATGGAACGGATCTGGTTGGAGAAGGTAGAAGTTCAGGATTTGAATGTTTTCTGAATGTAGTGAGAGCATTGGGAATGGGATCATGTATTGGAGTAGATGGTGGGTCCCCACCATTTCTTGCAGATTGTACTAGTAATAATAATTTGGATGGGGGAAAGAGAAGGAGATTGAAGGGTTCATCTTCATTTGATTATAAATTAGTACCTGGGAGAATGTTCCATAATGGATCTAGTGAAGTTGCATCTTTGTATAGTAAGCAAGGTAAAAAAGGGATCAACCAAGATGCCATGCTTGTCTGGGAGAACTTTTCTTCAAAGGAGGGAACCATATTTTGTGGTGTTTTTGATGGCCATGGACCTTATGGCCATAGGGTTGCAAAGGCAGTTAGGGATTCTTTTCCTTTAAAGCTTATTGCTCAATTGGATCTTCATCATAAGAATCAAGATAGACTCAGTGATCACAGCAGCATTGCTGGAAGTTATAATTCTGATATTGGGAGACTGGTTGATGAGAAACCTACTTTGACTGATAATGAGCTTGATGGAACAGATACTATTTTAACATTAAGAGAATCTTTTTTGAAGGCTTCTAAGTTTATGGATAAAGAACTGAAACTGCATCCTGATATCAATTGCTTTTGCAGTGGAACTACAGCAGTTACGTTAGTCAAGCAGGGGAAGGACCTTGTTATTGGAAATGTTGGGGACTCACGAGCTGTATTGGGTACACGAGATCATAACGATTCTCTCATTGCTGTTCAGTTGACCATTGACCTTAAGCCAAATCTTCCAAGGGAAGAAGAGAGGATCAAGCTTCGTAGAGGAAGGGTTTTTTCCCTTCAGAATGAACCTGATGTTTTTCGTGTTTGGCTGCCTAACAATGATTTCCCTGGACTTGCTATGGCACGGGCTTTTGGAGATTTTTGTCTGAAGGACTTTGGATTGATTGCTGTTCCAGATGTCTCGCATCACCGCCTTACTGAGAAGGATGAATTTGTTGTATTAGCAACAGATGGGATCTGGGATGTTTTATCAAATGAAGAAGTTGTGGACATTGTGGCATCTGCTTCACAGTCTAATGCTGCTCGAGTACTTGTTGAGTCGGCTGTAAAAGCATGGAAGACGAAATACCCTTCTTCTAAGATCGACGATTGTGCTGCAGTTTGCCTCTTCTTTGATTCAAGTTCAGAGTTGAAGTCTTCATATACAACAGACGAATCGATACCAGAGGCATCAATTGAGCAATCTGAGCATTCATCTCTTCTTGGCGAGAAGGGAATTGGAGGGGATGCACAATAG 1329 0.4116 MTQAVEVLNRYGTDLVGEGRSSGFECFLNVVRALGMGSCIGVDGGSPPFLADCTSNNNLDGGKRRRLKGSSSFDYKLVPGRMFHNGSSEVASLYSKQGKKGINQDAMLVWENFSSKEGTIFCGVFDGHGPYGHRVAKAVRDSFPLKLIAQLDLHHKNQDRLSDHSSIAGSYNSDIGRLVDEKPTLTDNELDGTDTILTLRESFLKASKFMDKELKLHPDINCFCSGTTAVTLVKQGKDLVIGNVGDSRAVLGTRDHNDSLIAVQLTIDLKPNLPREEERIKLRRGRVFSLQNEPDVFRVWLPNNDFPGLAMARAFGDFCLKDFGLIAVPDVSHHRLTEKDEFVVLATDGIWDVLSNEEVVDIVASASQSNAARVLVESAVKAWKTKYPSSKIDDCAAVCLFFDSSSELKSSYTTDESIPEASIEQSEHSSLLGEKGIGGDAQ* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0078 442 MobiDBLite consensus disorder prediction 408 429 - -
Lan2g0078 442 CDD PP2Cc 90 402 IPR001932 -
Lan2g0078 442 Coils Coil 438 442 - -
Lan2g0078 442 MobiDBLite consensus disorder prediction 408 442 - -
Lan2g0078 442 PANTHER ALPHABET, ISOFORM E-RELATED 36 414 - -
Lan2g0078 442 ProSiteProfiles PPM-type phosphatase domain profile. 90 402 IPR001932 -
Lan2g0078 442 SMART PP2C_4 84 400 IPR001932 -
Lan2g0078 442 SUPERFAMILY PP2C-like 86 403 IPR036457 -
Lan2g0078 442 Pfam Protein phosphatase 2C 187 381 IPR001932 -
Lan2g0078 442 Gene3D - 84 404 IPR036457 -
Lan2g0078 442 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 36 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0078 Lan-Chr2 702107 706404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0078 62 406 PP2C-type Phosphatase Gene Family AT1G16220 57.429 8.20e-145 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0078 - - gmx:100810538 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0069 9 490274 495340 Lan2g0078 2 702107 706404 LSH