Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0076 ATGACAAGTTTTCAGTTTCATTGGAAAGTGTTAAGTTTGTTGATTTCAGTTTCCTATTGCTTAGGAAACAATGACATGCAAGTTGAGTTGAATGATGATGTTCTTGGTCTGGTTATGTTCAAATCAGACATTCATGACCCTTTTTCTTATCTTGCTTCATGGAATGAAAATGATGTAAATCCTTGTTCATGGAAATTCATACAATGCAATCCTCAAAATGGAAGAGTTTTTAAGGTATCATTAGATGGTTTAGGATTATCTGGTAAGATAGGAAGAGGTCTTGAAAAGTTGCAGAATCTTAAGGTATTGTCCCTTTCATATAACAACTTCAGTAGTAGTATTAGTTCAGCACTTACTCTTCCTAGTACTCTTCAAAGGTTGAATCTTTGTCATAATGGTTTTTATGGTCCAATACCAAGTTCTTTTGTGAATATGAGTTCAATAAGGTTTCTTGATCTCTCTGAGAATTCATTTTCAGGACCAATCCCTTACAATTTTTTCGACGGCTGCTTTTTCCTTCATTACATTTCTTTAGCTAGGAATATGTTTGAAGGGTCAATTCCTAGCACACTTTCTAGATGTGCCATTTTGAATAGCCTTAATGTTTCCGATAACCGATTCGATGGTTATGTTGAGTTTACCGCGATTTGGTCGTTCAAAAGACTTAGGAAATTGGATCTATCCAACAATTCTTTATCTGGGTACTTAACTAATGGAGTTTCAGGCATATATAACCTGAAAGAGATCCTCTTACAAGGTAACCAGTTTTCGGGTCAATTACCTTCGGATATTGGCCTCTGCAGGCATTTGAATAGGTTGGATTTTAGTGATAATCAGTTCAGTGGAGAACTACCAGAATCACTTGGGAGGGTTAGTTCATTGAGCTATTTCAAGGCATCGAATAATCTTTTAACCGGTGAATTGCCGCAGTCGATTGGTAATATGACAAGTCTGGAATACCTTGATCTCTCAAACAATCAATTCACTGGAAGCATCCCTCATTCACTAGGGGGACTAATATCACTGACTTATCTAAGCATTTCAAATAACAAGCTTGTAGGAAATATTCCGTTGTCAATGGTTTCTTGCACGAAGTTATCAGTGATTAGGCTCGATGGTAATCGTTTCAATGGCAGCATACCGGAGGGTCTGTTTGGCCTAGGATTGGAGGAAATAGACTTTTCCAATAATGATCTGACAGGTTCAATTCCAGCAGGCTCAAACAGGCTCTTGGAAACTCTCACCGATTTGGACCTTTCGAAGAACCATCTCCAGGGAACTATCCCTGCAGAAATCAGTCTTCTTTCGAAACTGAGATATTTGAATTTGTCTTGGAATGATCTTCATTCACAGGTGCCTCCAGAATTTGGCCTCCTTCGGAATCTAACGGTTTTAGATCTACGAAACAGCGCCTTATATGGCGTTATTCCGGATGGTATATGTGATTCAGGCAATTTGGCCATTCTTGAACTGGATGGAAATTCATTGAAGGGGTCTATTCCTAATGAGATTGGGAATTGTTCATCTCTTTACTTATTGAGTTTGTCTCACAATAATTTGAGTGATGCTATTCCAAGGTCAATGTCAAAGCTAAACAAACTCAAAATCCTCAGATTAGAATTCAATGAACTAAGTGGAGAGATACCGATGGAGTTCGGATTGCTACAAAATCTTCTTGCTGCGAATATATCGTATAACAGGCTCACTGGCAGGCTTCCAACTGGTAGCATATTTCCGAACTTGGACAAAACTTCATTGGAAGGAAACCTTGGTCTCTGTTCACCTTTGTTGAAGGGTCCATGTAAGATGAATGTGCAAAAGCCACTAGTGCTTAATCCAAATGCATTTAACAACCAAGCAGGTTCTGATAGACACAGAAGTGAATCATCGATGTCTAGCACAATTCATCGCCACATGTTCCTTAGTGTTTCTGCTATCATAGCAATTTCGGCATCTTTTGTAATCATATTAGGAGTGGTTGCTATTTGTATACTTAATGTTTCTGTGAGGAAAAGACTATCATTTGTGGATAATGCTTTGGAAAGCATGTTCTCAAGCTCTTCTAGATCTTCAAGTCCACCCTCAGGAAAATTTATTCTGTTTGATTCGCATTCCTCGATTGATCGGATCAGCAATCTAGAATCCTTGCTCAACAAGGCATCTGAGGTTGGTGAAGGGGTGTTTGGAACAGTGTACAAGATTCCCTTAGGATCACATGGTAGAATGGTAGCTATGAAGAAGCTTATAACCTCAAACATAATCCAATATCCCGAAGACTTCGACAGGGAAGTTCGGATCCTAGGAAAAGCGAGGCATCCGAATCTAATAGCATTGAAAGGATACTACTGGACTCCTCAGCTTCAGATTTTAGTAACAGAATATGCACCAAATGGTAGCTTGCAATCCAAGCTACATGAAAGGCTTCCTTCAACTCCTCCTCTTTCATGGCCTAATAGATTCAAGATTTTGCTTGGAACAGCAAAGGGTCTAGCACATTTGCACCATTCGTACCGTCCACCAATAATCCACTACAACATAAAGCCAAGCAACATCTTACTCGACGAAAATTACAACCCAAAGATCTCCGATTTCGGGTTGGCCCAGCTTCTAACAAAGCTAGAAAAGCATGTAATGAGCAATAGATTTAAAACTGCACTAGGATATGTTGCACCAGAATTAGCATGCCAAAGCATAAGGGTCAATGAAAAATGTGATGTGTATGGTTTTGGAGTAATGATCCTCGAGTTAGTGACAGGAAAAAGACCAATTGAGTATGGAGAAGATAATGTGTTGATATTGAATGAACATGTAAGGATTCTTCTTGAACAAGGAAGTGTATTGGAATGTGTGGATTCAACAATGAATGAGTATCCAAATGATGAAGTGCTTCCAGTTCTGAAGCTTGCAATGGTTTGTATCTCTCAAATACCTTCTAGCAGACCTTCTATGACTGAAGTGGTGCAAATACTTCAACTCATTCAAACTCCAGTTACTCATAGGATGGAAATGTTTTAA 3015 0.3884 MTSFQFHWKVLSLLISVSYCLGNNDMQVELNDDVLGLVMFKSDIHDPFSYLASWNENDVNPCSWKFIQCNPQNGRVFKVSLDGLGLSGKIGRGLEKLQNLKVLSLSYNNFSSSISSALTLPSTLQRLNLCHNGFYGPIPSSFVNMSSIRFLDLSENSFSGPIPYNFFDGCFFLHYISLARNMFEGSIPSTLSRCAILNSLNVSDNRFDGYVEFTAIWSFKRLRKLDLSNNSLSGYLTNGVSGIYNLKEILLQGNQFSGQLPSDIGLCRHLNRLDFSDNQFSGELPESLGRVSSLSYFKASNNLLTGELPQSIGNMTSLEYLDLSNNQFTGSIPHSLGGLISLTYLSISNNKLVGNIPLSMVSCTKLSVIRLDGNRFNGSIPEGLFGLGLEEIDFSNNDLTGSIPAGSNRLLETLTDLDLSKNHLQGTIPAEISLLSKLRYLNLSWNDLHSQVPPEFGLLRNLTVLDLRNSALYGVIPDGICDSGNLAILELDGNSLKGSIPNEIGNCSSLYLLSLSHNNLSDAIPRSMSKLNKLKILRLEFNELSGEIPMEFGLLQNLLAANISYNRLTGRLPTGSIFPNLDKTSLEGNLGLCSPLLKGPCKMNVQKPLVLNPNAFNNQAGSDRHRSESSMSSTIHRHMFLSVSAIIAISASFVIILGVVAICILNVSVRKRLSFVDNALESMFSSSSRSSSPPSGKFILFDSHSSIDRISNLESLLNKASEVGEGVFGTVYKIPLGSHGRMVAMKKLITSNIIQYPEDFDREVRILGKARHPNLIALKGYYWTPQLQILVTEYAPNGSLQSKLHERLPSTPPLSWPNRFKILLGTAKGLAHLHHSYRPPIIHYNIKPSNILLDENYNPKISDFGLAQLLTKLEKHVMSNRFKTALGYVAPELACQSIRVNEKCDVYGFGVMILELVTGKRPIEYGEDNVLILNEHVRILLEQGSVLECVDSTMNEYPNDEVLPVLKLAMVCISQIPSSRPSMTEVVQILQLIQTPVTHRMEMF* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0076 1004 Pfam Leucine rich repeat 389 448 IPR001611 GO:0005515
Lan2g0076 1004 Pfam Leucine rich repeat 317 376 IPR001611 GO:0005515
Lan2g0076 1004 Gene3D Phosphorylase Kinase; domain 1 717 798 - -
Lan2g0076 1004 Pfam Protein kinase domain 719 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0076 1004 Gene3D Ribonuclease Inhibitor 196 311 IPR032675 -
Lan2g0076 1004 ProSiteProfiles Protein kinase domain profile. 717 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0076 1004 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lan2g0076 1004 SUPERFAMILY L domain-like 309 586 - -
Lan2g0076 1004 Gene3D Ribonuclease Inhibitor 316 604 IPR032675 -
Lan2g0076 1004 PRINTS Leucine-rich repeat signature 222 235 - -
Lan2g0076 1004 PRINTS Leucine-rich repeat signature 315 328 - -
Lan2g0076 1004 PANTHER BNAA09G02190D PROTEIN 11 1002 - -
Lan2g0076 1004 SMART LRR_typ_2 97 120 IPR003591 -
Lan2g0076 1004 SMART LRR_typ_2 219 242 IPR003591 -
Lan2g0076 1004 SMART LRR_typ_2 435 458 IPR003591 -
Lan2g0076 1004 SMART LRR_typ_2 145 169 IPR003591 -
Lan2g0076 1004 SMART LRR_typ_2 363 387 IPR003591 -
Lan2g0076 1004 SMART LRR_typ_2 411 434 IPR003591 -
Lan2g0076 1004 SMART LRR_typ_2 243 267 IPR003591 -
Lan2g0076 1004 SMART LRR_typ_2 459 483 IPR003591 -
Lan2g0076 1004 SMART LRR_typ_2 315 339 IPR003591 -
Lan2g0076 1004 SUPERFAMILY Protein kinase-like (PK-like) 720 997 IPR011009 -
Lan2g0076 1004 Gene3D Ribonuclease Inhibitor 31 195 IPR032675 -
Lan2g0076 1004 Gene3D Transferase(Phosphotransferase) domain 1 799 1002 - -
Lan2g0076 1004 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 1002 - -
Lan2g0076 1004 CDD STKc_IRAK 723 993 - -
Lan2g0076 1004 ProSitePatterns Protein kinases ATP-binding region signature. 723 746 IPR017441 GO:0005524
Lan2g0076 1004 SUPERFAMILY L domain-like 40 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0076 Lan-Chr2 692130 695273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0076 1 1001 Receptor kinase-like Gene Family AT3G28040 60.336 0.0 1186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lan2g0076 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0076 - - gmx:100795810 1553.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0076 2 692130 695273 Lan8g0115 8 1878536 1895744 LSH