Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0068 ATGGTTGGAAACGACGATGGTGGTGCTCGGAAAATATTCTGGCGCTCCGCCTCTTGGTCCGGCGAGGCGAGGAATGATTTCGCCGATCCAAATTCCGGCGACGGTCAGAATCGGCGATTCCCTCTGCCACCGCTACCACTAACGCCTCGATCGCAGCAGCAAAGTTCCAAGTCCCGGTCGTGCCTTCCGCCGCTGTCCATTGCTCGCCGGAGCTTGGAGGAGTGGCCGAAGGCGAGCTCTGATGATATCGGCGAGTGGCCGGAGATTCCAACTACGCCTAGTGGTGGTGGGAGAGGTAGTAGTAGTAGTAATAATAATGGTGAAAAGTTGAAACTTGATTTGTCTTCAATTCAGAAAAATCATGATAATATGAATAATTGTAATGGTAATAGTAGTGTTGGACTTGTGAAGAGGGATAAGATTGCTTTTTTCGATAAGGAATGTTCGAAAGTCGCGGATCATGTTTATCTTGGTGGTGATGCTGTTGCTAAAGATAGGGATATTTTGAAACACAATGGGATTACTCATGTTTTGAATTGTGTGGGTTTTGTGTGTCCTGAATATTTTAAGGCTGATTTTGTGTATAGGACATTGTGGCTGCAGGATAATCCATCCGAGGATATCACTAGTATTCTCTATGATGTGTTTGATTACTTTGAGGATGTTAGGGAACATGGTGGGAGGGTGTTTGTGCATTGTTGCCAAGGGGTGTCTAGGTCCACTTCTTTGGTTATTGCTTACCTTATGTGGAGGGAAGGTCAGAGTTTCGATGATGCTTTTCAGTATGTTAAGGCGGCGAGAGGTATAGCCGATCCGAATATGGGTTTTGCTTGCCAGTTGTTACAGTGCCAGAAAAGGGTCCATGCAGTTCCTCTCAGCCCTAGCTCTTTGCTGAGGATGTATAGGATAACCCCACATTCGCCGTATGACCCTTTGCATCTTGTCCCCAAAATGTTGATGGATCCATCTTCGTCTGCGCTGGACTCTAGAGGTGCATTTATTGTGCACATTCCTTCTGCGATGTATGTTTGGATTGGTAAGAATTGTGAAGCCATTATGGAAAGGGATGCTAGAGGGGCCGTGGGTCAGATCGTTCGCTATGAGAAAGTGCAAGGACCTATTGTAATGATTAAGGAAGGTGACGAACCGACTTACTTTTGGGATACTTTTTCAAATTTCTTGCCTCTGATGGACAAATCTGGGAATGGAGTTGAAAATATCAAATCAAGTGTTATGGTTTGGCCTGGTGAGAGGAGAGTGAGCTCATATGATCTTGATTTTGAAGTTTTCAGAAGAGCTATTAAGGGAGGTATTGTGCCACCGTTTACATCATCAGAGGATGAACATGAAACCCTTCTTCCTGCTAGAGAGAGTAGCTGGAGTGTATTAAGGTGTAAACTTTCCTCCGCTACTATGAAGGAGTTTGTCTCAGCCCCGAAGTTACCCTTTCAAAGGGTTTATTCAGATTCCATGTTGTGCATTCATACATCAGCAAATTCATCTCCATCTATGTCAATTTCGTCATCATCCTCATCATCATCTTCACCCTTCTATGTCTCTCCAAATTACATTTCTTCTGATTCAAGCACGCACCCAAAGTTTTTGTCAGAATTGACCCTGGGTTCTTCGTCTGAAGTTTTGGTTTCAGTTCCAGTGTCTTCACCTTTGTCTACCTTCTCTAATTTGTCTCTCTCTTCAGAACCAGTGTCTAACAGTGCAGATATCCGCAGTATGAAGATATCACATCCTCACTCTCAGTCAGCCTTACCATTGAAGAAACCATCTACTTCCCTTGCTGAACGAAGAGGTAGTTTGTCGAAGTCCTTGAAGTTGCCACTAATGAATGATAATACACAAGAAATAAATACAGCATCGACTTTTCATGCCAGTTCAGAAGCTGGAGTTCTTATGAATGGCAATGTGAGCCATTTACAACAGTCAGATAGTTCAAACCATTTTTATGAGGCCAACGACCATCTCAATGATACAGGTGTGAATGCTCCTCAACAGTTTGAGCTGACATTATGTCCGGACAATGTTGATGGTGTGGACTTCTTGGAATCTTCACTTGTCCGAGACTGTGTTGAGCCTTTGATAGATACTCCCTCAAGAGAAGACTTAAAGTCTACTTCATCAAATGGAATTGATGAGTGTGGATCATTGCAGCATAGCATGACAACAACTTCAGTGTATCACTGGCCCAGTTTAGAAAAGATTGAGACATTCGGTGCAAGTCATCTGGATTCTAAAGTTGCTTTTGTTGTGTTCACTCCAAGTATGCCTGCATGTGCAGGGAATGTTTTATATTTCTGGTTAGGGAGGTCTTTCAGTTGTGATACTTCACAGGTTCAGGTAGATAGTGATAGAGAGTCAAATTTTCTAAGGGCAGTTGACTGGAATCGAATTGGTGGCGGCGTCCTTGCTCGGTTTAGTTTGCCAAAGAATACAATCATAAAGATTGTCAAAGAGAATGAAGAACCAGAAGAGTTTCTCGCCTTACTGAGATCATTGTAG 2514 0.4344 MVGNDDGGARKIFWRSASWSGEARNDFADPNSGDGQNRRFPLPPLPLTPRSQQQSSKSRSCLPPLSIARRSLEEWPKASSDDIGEWPEIPTTPSGGGRGSSSSNNNGEKLKLDLSSIQKNHDNMNNCNGNSSVGLVKRDKIAFFDKECSKVADHVYLGGDAVAKDRDILKHNGITHVLNCVGFVCPEYFKADFVYRTLWLQDNPSEDITSILYDVFDYFEDVREHGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAVPLSPSSLLRMYRITPHSPYDPLHLVPKMLMDPSSSALDSRGAFIVHIPSAMYVWIGKNCEAIMERDARGAVGQIVRYEKVQGPIVMIKEGDEPTYFWDTFSNFLPLMDKSGNGVENIKSSVMVWPGERRVSSYDLDFEVFRRAIKGGIVPPFTSSEDEHETLLPARESSWSVLRCKLSSATMKEFVSAPKLPFQRVYSDSMLCIHTSANSSPSMSISSSSSSSSSPFYVSPNYISSDSSTHPKFLSELTLGSSSEVLVSVPVSSPLSTFSNLSLSSEPVSNSADIRSMKISHPHSQSALPLKKPSTSLAERRGSLSKSLKLPLMNDNTQEINTASTFHASSEAGVLMNGNVSHLQQSDSSNHFYEANDHLNDTGVNAPQQFELTLCPDNVDGVDFLESSLVRDCVEPLIDTPSREDLKSTSSNGIDECGSLQHSMTTTSVYHWPSLEKIETFGASHLDSKVAFVVFTPSMPACAGNVLYFWLGRSFSCDTSQVQVDSDRESNFLRAVDWNRIGGGVLARFSLPKNTIIKIVKENEEPEEFLALLRSL* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0068 837 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 140 288 IPR029021 -
Lan2g0068 837 ProSitePatterns Tyrosine specific protein phosphatases active site. 231 241 IPR016130 GO:0016311|GO:0016791
Lan2g0068 837 Gene3D Severin 298 394 IPR029006 -
Lan2g0068 837 ProSiteProfiles Dual specificity protein phosphatase domain profile. 147 289 IPR020422 GO:0006470|GO:0008138
Lan2g0068 837 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 831 - -
Lan2g0068 837 Pfam Dual specificity phosphatase, catalytic domain 155 285 IPR000340 GO:0008138|GO:0016311
Lan2g0068 837 PANTHER MKPA PROTEIN 1 831 - -
Lan2g0068 837 CDD DSP 148 282 - -
Lan2g0068 837 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 206 267 IPR000387 GO:0016311|GO:0016791
Lan2g0068 837 MobiDBLite consensus disorder prediction 21 108 - -
Lan2g0068 837 Gene3D Protein tyrosine phosphatase superfamily 115 289 IPR029021 -
Lan2g0068 837 MobiDBLite consensus disorder prediction 94 108 - -
Lan2g0068 837 SUPERFAMILY Actin depolymerizing proteins 294 406 - -
Lan2g0068 837 SMART dsp_5 147 286 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0068 Lan-Chr2 619099 626074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0068 2 183 Protein tyrosine phosphatase (PTP) family AT3G55270 55.330 1.36e-52 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0068 - - mtr:MTR_7g023250 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0068 2 619099 626074 Lan8g0098 8 1651910 1655624 LSH