Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan2g0064 | ATGACCATAACGACGATGACCGAGGTCGTTTCAAAGCCACCTTCATTCCTCGTCTCTGAATTCAACTCTCTTCTCACCGACCGTGTTCTTCACGCGCCGCCTTCTCATGAAGAACAAATCGTTTCTCACATTTACGATTCCTTATTATCTCAACTAACCTCCAATTTTAAACACGTTATCATCGATCTCACTGTAATCGCTCAACAACAAAAGAAACACGCTAACATCATTGCTAATACTATTTGCTCTCGTATTCTTAAGGTGCCTGCAGATCAAAAGCTCCCTACACTTTATCTTTTGGATAGTATTGTAAAAAACTTCGGCCAGCAATATGTCAGATACTTCTCTTTACGTCTATCCGAAGTTTTCTGCGAGGTGTACAGGCACGTTCAGCCTAATATGCATTCTGCTATGCGATATCTCTTTGGTACCTGGTCAAAAGTCTTTCCTCCCTCTGTCCTATGCAAAATTGAATCTCAATTGCAATTTTCTGACGCGGTTAATAATAGTCAATCATCAAGTATTAATCCTCTCATGGCATCTGAATCTACTCGAGCGACTCATGGAATACATGCTAACCCGAAGTACTTGCGGCAGATGGAACGATCTAGTGCAATTATGGATACTGTTGGAGGTGAAAGGTTAGAGTCAGCAGGAACTTTAGGTAATATAAACAAATCTCATTCTGTAGTGGATAAGGGAGTAGCAAAAGCACCAGGTAGAGAAGAAGAGCTGAGTGAGTGGCAGCGAAAGCAGTATTCTGTCCATGGTCGGAAAAGACTTCGAACTTCCATGACATACAGTGACAGTCTTAATAATGGACAACAGCATCCAAGTCCAAAATCTCTAATTGATGCATATGGCACTGACAAACGCCAAGAAACTTCTGGCAATAAGGCTTTGTCAATTGAATGGCTGGATAGAAATGGTGTAGATAACAAGGTTTTGGCAACCTCATGGCAGAATACCCAAGAGGAGGAGTTTAATTGGGAAGAGATGAGTCCAACGCTAGTAGACCGTAGAAGAAATAATGCTTTCTTCAAGGAAAGACCTTTTATTGTTGCAACTAATGCAAATTCTTCCGAGCAAGATACCAAGAAGAGTTTGTCCAGTGGGTCTCAGCATCCTGCAGTAGATGATTCCTCTGTTGTAGCAGAACATGCACTTTCCTCTTCAGCTTATGGTTGTGTATCCCATGGTCAGATGTCTGGACTCCAAAATCAAATAAATCAGACTCTAGGCTCCAGTCAACATTTTGATGCTTGGAAGATTGGTAATCATCCATCTAATTCTTCACAACACCTCTTCAATAGTAGGGGATCGGAAATGAGTCTTCTGAAGCCTCCTATTGGTAACATTCCCAATACTCATGTAAACCCATACGGGTCACGACCGACTATGCCAAGTATTGTCCCTGGTTTAAAGTATAATGTGGAGGCTCGTCCACCAGCTTTTCCAGCGTCTTTTGAAATGAGTAATTCTGTAAACGAGCATGCCACGGGTCCTCCCAGATTAAATCATATATTCCCATTGCAAAACCATGTTAGGAGTCAATTTGCAGTAAATGCTAATAACACCATAGTGAGTCATGATCCACATAAATCGCTGTTTACGCACAAACAGCCGTCAGACAGTGTTGATAATAAAAATATCAGTAAAGGACAGCATCATCAGTTTCCTAATCAGCTACCTGGCCTGGTTTCATCTAATCAGCAAAACCATGGACAAGCACCACAATTACAGTTTCTTTCATCTCAGGCTTCTGCAGCATCACAATTTAGTCATGGGGGCACTTTGCAAGGACATGGTGCTCCTATAAGTGCATCCGTGTCAAATCCGCTGCCTACTATGAAATTCCCCTTGCCAGGCCAATATATCACAAATAACTCTTTACATTTACAAGGGGGAGCATTGCCACGTTTGCCTCCAAGTCGGCCTCCTGCTCCGTCACAAATACCTCATCCTAATGCTAGTCCTTTTGTGTCTAGTCAACAGCCAACTCCGGCATATTCTAATTTGATTAGTTCACTTATGGCCCAAGGTTTGATCTCAATGACTAATGAGCCCACTAGACAGGATTCTGTTGGGACCAAATTTGATCCAGATATTCTGAAGGTTCGTCATGAAGTTGCTATCAGCGACTTATATGATAATCTCCCCAGACAATGCAAAACTTGTGGCCTCCGCTTCAAATGCCAAGATGACCACAGAAGTCATATGGATTGGCACGTTACTAAGAACCGGATGTCTAAAAATCGAAAGCAGAATCCCTCTCGTAAGTGGTTTGTGAGCAGAAGGATGTGGCTCAGTGGTGCAGAGGCAATGGGAAAAGAATCAGTTCCAGGTTTTTCCCCAACTGAGACGAGCGTCGAGGAAAAGAAAGATGATGAAGAGTTGGCTGTGCTGGCCGAAGAGGACCAAAATACATGTGCATTATGTGAAGAGCCTTTTGAGAAGTTTTATAGTGATGAAACAGAAGATTGGATGTATAGAGAAGCTGTATACCTTAATGCACCTAAGGGTACAACAGAAGGAATGGAAAGGTCACAGTTAGGCCCCATTATTCATGCTAAATGCAAATCTGAGGCTAGCATGTCCACTTCTTTAGAAGGGGTATGTGTTTCTCATTCTATATTTCTCTTGCCAAATTCATCTAAAAGTGTATAG | 2667 | 0.4214 | MTITTMTEVVSKPPSFLVSEFNSLLTDRVLHAPPSHEEQIVSHIYDSLLSQLTSNFKHVIIDLTVIAQQQKKHANIIANTICSRILKVPADQKLPTLYLLDSIVKNFGQQYVRYFSLRLSEVFCEVYRHVQPNMHSAMRYLFGTWSKVFPPSVLCKIESQLQFSDAVNNSQSSSINPLMASESTRATHGIHANPKYLRQMERSSAIMDTVGGERLESAGTLGNINKSHSVVDKGVAKAPGREEELSEWQRKQYSVHGRKRLRTSMTYSDSLNNGQQHPSPKSLIDAYGTDKRQETSGNKALSIEWLDRNGVDNKVLATSWQNTQEEEFNWEEMSPTLVDRRRNNAFFKERPFIVATNANSSEQDTKKSLSSGSQHPAVDDSSVVAEHALSSSAYGCVSHGQMSGLQNQINQTLGSSQHFDAWKIGNHPSNSSQHLFNSRGSEMSLLKPPIGNIPNTHVNPYGSRPTMPSIVPGLKYNVEARPPAFPASFEMSNSVNEHATGPPRLNHIFPLQNHVRSQFAVNANNTIVSHDPHKSLFTHKQPSDSVDNKNISKGQHHQFPNQLPGLVSSNQQNHGQAPQLQFLSSQASAASQFSHGGTLQGHGAPISASVSNPLPTMKFPLPGQYITNNSLHLQGGALPRLPPSRPPAPSQIPHPNASPFVSSQQPTPAYSNLISSLMAQGLISMTNEPTRQDSVGTKFDPDILKVRHEVAISDLYDNLPRQCKTCGLRFKCQDDHRSHMDWHVTKNRMSKNRKQNPSRKWFVSRRMWLSGAEAMGKESVPGFSPTETSVEEKKDDEELAVLAEEDQNTCALCEEPFEKFYSDETEDWMYREAVYLNAPKGTTEGMERSQLGPIIHAKCKSEASMSTSLEGVCVSHSIFLLPNSSKSV* | 889 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan2g0064 | 888 | MobiDBLite | consensus disorder prediction | 633 | 665 | - | - | |
| Lan2g0064 | 888 | SMART | 558neu5 | 40 | 162 | IPR006569 | - | |
| Lan2g0064 | 888 | MobiDBLite | consensus disorder prediction | 640 | 654 | - | - | |
| Lan2g0064 | 888 | ProSiteProfiles | CID domain profile. | 37 | 165 | IPR006569 | - | |
| Lan2g0064 | 888 | MobiDBLite | consensus disorder prediction | 357 | 378 | - | - | |
| Lan2g0064 | 888 | MobiDBLite | consensus disorder prediction | 357 | 382 | - | - | |
| Lan2g0064 | 888 | Gene3D | - | 32 | 163 | IPR008942 | - | |
| Lan2g0064 | 888 | PANTHER | POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 | 15 | 864 | - | - | |
| Lan2g0064 | 888 | PANTHER | PRE-MRNA CLEAVAGE COMPLEX II | 15 | 864 | IPR045154 | GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379 | |
| Lan2g0064 | 888 | MobiDBLite | consensus disorder prediction | 541 | 577 | - | - | |
| Lan2g0064 | 888 | Pfam | CID domain | 46 | 154 | IPR006569 | - | |
| Lan2g0064 | 888 | MobiDBLite | consensus disorder prediction | 533 | 577 | - | - | |
| Lan2g0064 | 888 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 723 | 743 | IPR013087 | - | |
| Lan2g0064 | 888 | CDD | CID_Pcf11 | 45 | 162 | - | - | |
| Lan2g0064 | 888 | SUPERFAMILY | ENTH/VHS domain | 43 | 162 | IPR008942 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan2g0064 | Lan-Chr2 | 584007 | 589007 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan2g0064 | 661 | 871 | C2H2 Transcription Factor Family | AT4G04885 | 66.351 | 1.43e-92 | 308 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan2g0064 | K14400 | - | gmx:100794796 | 1015.76 |