Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0038 ATGAAATCCACTCTATCTTCTTTGACAGGCCTTCGATCAGCATCATCATGGTTCGAGTTATACGCAGCCTTCTCCACATTCATGATGCTTCTAAGAACAGCCATCAATGATCTCATACCATCCCAAGTTCGATCCTTCATCACAACAAAGCTTGAATCTTTCTTCTCCAATATTTACCAATCAAACAACACTGCATCTCTCACAATTAACCGAATTTGGGACGAAAGTTCGAGAAATAACGAACTTTATCAGGCTGTGTGCAACTACCTTCCCTCAAGAGTAAGTCAAAGTTACAAGTCGCTCAAAATTGGCAAACTAGATGACTGTAAAGATCTCATGTTCGCAGTGGACGCAACAGAAGAAGTGGCAGATGAATTTGAAGGCATCAAGTTCACTTGGATGCTAGATGAAGGTTCTTCTGAAAAGGAACGTAGGGATTTGGATAAGCTAGCTTTTAAGTTAAGCTTCGATGAGAAACATAGAAAGATAGCAATGGAAAAGTACATACCCCATGTACTAAAAACATATGAGGACTTCAAATCTGAACGTAAGATTCTTAAACTGAATTCATGGTCAAATGGGTATTGGGGAGAGAATGAGTTGTCACATCCTGCAACATTCGAAACACTTGGCTTGGACCCAGAATTGAAGCAGAGAATTATTGATGATTTGAAACGGTTCTTGAAGAGGAAAGAAATGTATAAGAGAGTGGGTAAGCCATGGAAACGTGGATACTTATTGTATGGTCCTCCAGGAACTGGAAAATCTAGCTTGATTGCAGCTATGGCGAATTATTTGAAATTTGATGTGTATGATTTAGATTTGAACTCTGTTTATTCTAACTCGGATCTTATGAATGCAATGAGGAGTACAACAAGACGTTCAATTATTGTACTTGAAGATATAGACTGCAATAAAGAGGTGAATGCTCGAACACTTAAGGATGAGGAGAATTCAGATTGTGATTATACCCAAGATGCTAAGGTTGAAGATATTAAGGTTGAAAGATTTACTCTCTCTGGTCTACTCAACTGCGTGGATGGCTTATGGTCAAGCCACGGAGAGGAACGAATTATAATATTTACAACAAACCACGTAGAAAAAATTGACCCAGCATTGCTACGCCCTGGTCGAATGGACATGCACATTAACTTGTCCTTCCTTAAAGCCAAGGCATTCAGAATCTTAGCCTCCAATTATTTCGACATTAGAGACAAGCATCCTCTGTTTGAACAAATTGAAGAGTTGCTGGAGAAAACAGAGTTCACCCCAGCAGAAGTGGCAGAGCAGCTTATGAGAAATGAAGATCCAGATATTGCTTTTGAAGCACTATTAAAATTTCTCTCAGAGGTTGACATGAAGAGGGAAGTGAAAAAAGGCAGTGAGAGTAGTAATAGTGAAAATTGA 1407 0.3909 MKSTLSSLTGLRSASSWFELYAAFSTFMMLLRTAINDLIPSQVRSFITTKLESFFSNIYQSNNTASLTINRIWDESSRNNELYQAVCNYLPSRVSQSYKSLKIGKLDDCKDLMFAVDATEEVADEFEGIKFTWMLDEGSSEKERRDLDKLAFKLSFDEKHRKIAMEKYIPHVLKTYEDFKSERKILKLNSWSNGYWGENELSHPATFETLGLDPELKQRIIDDLKRFLKRKEMYKRVGKPWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLDLNSVYSNSDLMNAMRSTTRRSIIVLEDIDCNKEVNARTLKDEENSDCDYTQDAKVEDIKVERFTLSGLLNCVDGLWSSHGEERIIIFTTNHVEKIDPALLRPGRMDMHINLSFLKAKAFRILASNYFDIRDKHPLFEQIEELLEKTEFTPAEVAEQLMRNEDPDIAFEALLKFLSEVDMKREVKKGSESSNSEN* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0038 468 CDD AAA 218 386 - -
Lan2g0038 468 Pfam Domain associated at C-terminal with AAA 39 135 IPR025753 -
Lan2g0038 468 ProSitePatterns AAA-protein family signature. 357 375 IPR003960 GO:0005524|GO:0016887
Lan2g0038 468 Gene3D - 384 450 - -
Lan2g0038 468 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 10 456 - -
Lan2g0038 468 Gene3D - 198 383 IPR027417 -
Lan2g0038 468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 436 IPR027417 -
Lan2g0038 468 Pfam ATPase family associated with various cellular activities (AAA) 246 385 IPR003959 GO:0005524|GO:0016887
Lan2g0038 468 PANTHER BCS1 AAA-TYPE ATPASE 10 456 - -
Lan2g0038 468 SMART AAA_5 241 389 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0038 Lan-Chr2 253466 255718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0038 243 385 Calmodulin-binding Proteins AT3G56690 30.201 4.45e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0038 - K08900 gmx:100789094 588.186