Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0034 ATGAAAACCCTCTTGCTTCATTCTCATCCCTTTTTCTTTTGCATAGCCATTTCCATCATCTTAATCAATATTACATCTCATGTTTCTGCTAATGATTATACAAAGTGCTATGCCACTCACGTTTATAGCTGTGGAACCATCACAAACCTCACATACCCATTCTCTGGAGGAACTAGACCAGAATATTGTGGTGAACCTAACTTGAAGGTAAATTGTGAAAACCATGTTCCAAAATTCACAGTGAATTCAGTAACATATAGGATTATTGATTGGGACTTGAAAACACAGAATCTCAAAGTGGCTAGGGATGATTTATGGGATACTGTGTGTTTGACTAGTTACCATGCTACTAGCTTTGAAAACACTGTGTTTTATTTTAATGGTGGACTTGCAAATATTACACTTTTATATGATTGCACTGGCAATACACAACCTACTCCTAATAGTGAAGACTGTGGTGGTGGCAAATATGTTTATTATGGTGTTGGAATTTTGCCTACTAACTATTGCAAAAGTGTTATTGTTCCAATTTCTGGAACCCTAGCTCAAGATGTAGCTAAGGATGAAAGTATTATCCCAAACACACTAAAAGATGGTTTTGAATTGAGATGGGACCAAAGCTATGCTCAGTGCAGCACTTGTGTTGAGACTGGTGGGGTTTGCGGCAACAAGGATGACCAATTTGGTTGTTTCTGCAACAATGGAACTCTATGTCAAGAGAAAGGCAAAAGCAAAGTAGGTGTTGCACTAGGTGCTACTGCAGGAGCTGTTGTTGCCCTTGTTGCCATTTTTGGATTTGCATGCTTTATGGTGAAAAGAAAGAAAAAAATTGCTGCTATTACTAAACAATCAAGAAGCAATGACCACTTTTTACCTCCTTCAAGCAATGATGATACTTTTACCTCTACAACTAACATGTCACAAAGTGTACCTTCTTACATATCTTCGAAGACCGACTCCGTGCCGCCGATGAAGAGTTTCTACTTCGGCGTCCAAGTGTTTACCATTGATGAATTAGAGGAAGCTACAGATAGTTTTCACCCTTCTAGAGAGATTGGTGAGGGAGGTTTTGGTACTGTATACAAAGGTGAACTCAAAGATGGACGCGTGGTTGCGGTGAAACGCCATTATGAAAGCAATTTTAAAAGAGTTCAGCAGTTCATGAATGAAGTTGAGATTTTGGCTAAGTTGAGGCATAAGAATTTGGTAACACTCTATGGATGTACTTCTAGGCATAGCAGAGAACTTCTGCTTGTTTATGAATTCATATCCAATGGAACAGTGGCTGATCATCTCCACGGAAACAGCGCGAATTCTAATTTCGTATCTTGGCCTGTAAGACTAAACATTGCTATCGAAACGGCCGAGGCGCTAGCCTACCTCCATGCATCAGATGTCATACATCGCGATGTTAAATCCAACAACATTCTCCTGGATGACAAGTTTCGCGTTAAGGTTGCTGATTTTGGTTTGTCAAGGTTGTTCCCGAATGATGCTACTCATGTATCAACTGCTCCTCAAGGAACACCTGGTTATGTTGATCCTGAGTACTATCAGTGCTACCAACTCAACGATAAGAGCGATGTTTATAGCTTTGGAGTGCTCTTAATCGAGCTTATATCATCGCTACAAGCCGTGGATGTTAGCAGGCATCGCAATGATGTGAATTTAGCCAACATGGCCCTCAATAAAATTCAAAACCAAGAAGTTCGCGACTTGGTCGATCCACATCTTGGATATGACAAGGACTATGCTATAAGGAAGATGACAACAGGAGTAGCCGAATTGGCGTTTCGATGTTTGCAGCAGCAGAGAGATATGAGACCCTCAATGGATGAGGTGCTAGAGGTATTGAGAGGAATCAAGAGTGATGAGCCTGGTGCAATGGAAGCTGAGGTACTGAATGTTAGAAAAGAAGATGTTATACTTTCTAACAACATTCCTTATCCACTTTCTTCAACTGATTCATTTGATGATAAATGGGTTAGAAGCACTTCTACATCTAATTCTTCTTAG 2016 0.4018 MKTLLLHSHPFFFCIAISIILINITSHVSANDYTKCYATHVYSCGTITNLTYPFSGGTRPEYCGEPNLKVNCENHVPKFTVNSVTYRIIDWDLKTQNLKVARDDLWDTVCLTSYHATSFENTVFYFNGGLANITLLYDCTGNTQPTPNSEDCGGGKYVYYGVGILPTNYCKSVIVPISGTLAQDVAKDESIIPNTLKDGFELRWDQSYAQCSTCVETGGVCGNKDDQFGCFCNNGTLCQEKGKSKVGVALGATAGAVVALVAIFGFACFMVKRKKKIAAITKQSRSNDHFLPPSSNDDTFTSTTNMSQSVPSYISSKTDSVPPMKSFYFGVQVFTIDELEEATDSFHPSREIGEGGFGTVYKGELKDGRVVAVKRHYESNFKRVQQFMNEVEILAKLRHKNLVTLYGCTSRHSRELLLVYEFISNGTVADHLHGNSANSNFVSWPVRLNIAIETAEALAYLHASDVIHRDVKSNNILLDDKFRVKVADFGLSRLFPNDATHVSTAPQGTPGYVDPEYYQCYQLNDKSDVYSFGVLLIELISSLQAVDVSRHRNDVNLANMALNKIQNQEVRDLVDPHLGYDKDYAIRKMTTGVAELAFRCLQQQRDMRPSMDEVLEVLRGIKSDEPGAMEAEVLNVRKEDVILSNNIPYPLSSTDSFDDKWVRSTSTSNSS* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0034 671 Pfam Protein kinase domain 347 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0034 671 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 671 IPR044652 -
Lan2g0034 671 Gene3D Transferase(Phosphotransferase) domain 1 423 630 - -
Lan2g0034 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Lan2g0034 671 Gene3D Phosphorylase Kinase; domain 1 321 422 - -
Lan2g0034 671 SMART serkin_6 346 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0034 671 CDD STKc_IRAK 352 621 - -
Lan2g0034 671 Pfam Wall-associated receptor kinase galacturonan-binding 43 101 IPR025287 GO:0030247
Lan2g0034 671 ProSiteProfiles Protein kinase domain profile. 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0034 671 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Lan2g0034 671 Pfam Wall-associated receptor kinase C-terminal 168 234 IPR032872 -
Lan2g0034 671 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 15 671 - -
Lan2g0034 671 SUPERFAMILY Protein kinase-like (PK-like) 320 624 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0034 Lan-Chr2 207202 211990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0034 42 671 Receptor kinase-like Gene Family AT1G25390 40.602 1.59e-148 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan2g0034 Pkinase 3.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0034 - - cam:101490779 721.465