Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0032 ATGAAAACCCTCTTGCTTCATTCTTATCCCTTTTTCTTTTTCATAGCCACTTCCATCATCTTAACCAATATTACATCTCACGTTTCTGCTAATGATTATACAAAGTGCTATGCCACTAACACTTATAGCTGTGGAACCATCACAAACCTCACATACCCATTCTCTGGAGGAACTAGACCAGAATATTGTGGTGAACCTAACTTGAAGGTAAATTGTGAAAACCATGTTCCAAAATTCACAGTGAATTCAGTAACATATAGGATTATTGATTGGGACTTGAAAACACAGAATCTCAAAGTGGCTAGGGATGATTTATGGGATACTGTGTGTTTGACTAGTTACCATGCTACTAGCTTTGAAAACACTGTGTTTTATTTTAATGGTGGACTTGCAAATGTTACAGTACTTTTATATGATTGCACTGGCAACACACAACCTACTCCTAATAGTGAAGACTGTGGTGGTGGCAAATATGTTTATTATGGTGCTGGAGTTTTGCCTACTAACTATTGCAAAAGTATTATTGTCCCAATTTCTGGAACCCTAGCTCAAGATGTAGCTAAGGATGAAAGTATTATCCCAAACACACTAAAAGATGGTTTTGAATTGAGATGGGACCAAAGCTATGCTAAGTGCAGCACTTGTGTTGAGACTGGTGGGGTATGCGGCAACAATGATGCACAATTTGGCTGTTTCTGCAACAATGGAACTCTATGTCAAGAGTCAAAGAAAAATAGCCGTATGGTCATGCTCATAGCTACAACAGTTTCTGCAGCTTTGGTAATTGGTGTTTTAATTATTATGATCTACATCTTTAGAAGGAGATTATGGTTTCATAAAATGAATCAATTATGGAATGAAAACTCTAAAGCTCATCAAGATTTTGAGGCTTTTCTCAAGACACATGGACCACTTGGTATAAGAAGATATAGCTACATAGAGATAAAGAAAATGACAAATTCATTCTCAGAAAAACTAGGGCAAGGAGGATATGGTGGTGTTTTCAAAGGGAAATTACATGATCAACGCCTAGTTGCTGTGAAGATGTTGAATAAATCAAAAGGTAATGGAGATGAGTTCATCAATGAGGTAGCAAGCATTAGTAGAACATCTCATATTAACATAGTCACTTTACTAGGATTTTGCTATGAAAGATGTAAGAGAGCATTAATATATGAGTACATGTCTAATGGGTCTTTAGAGAAGTTCATATACCAAACCAATCCAAATATAGTAAATAACCAATTGAATTGGGAAACATTATACCAAATTGCAATTGGTGTTTCTAGAGGATTGGAATATTTGCACAAAGGATGTAATACTAGAATATTCCATTTTGACATAAAGCCACACAACATACTATTGGATGATAACTTCATTCCTAAGATATCGGATTTTGGATTGGCTAAAATAAGTCCTAAAAATGAGAGCATGATATCAATGTTGGGTGCTAGAGGAACCCCAGGATACATTGCACCCGAGGTATTTTCGAGAAATATTGGAGTGGTATCTCATAAATCAGATGTCTATAGTTTCGGAATGATGGTTTTGGAAATGGTAGGTGGGAGAAAGAATATGAGTGTTGAAGTTGATTGCACTAGTGAAATTTATTTTCCTTATTGGATATATAAGCGTATAGAATTGAATGAAGATATACCACTTAAGAACATTACTAATGAAAGTGATGAAGAGATGATGAGAAAGATGGTAATAGTAAGCTTATGGTGCATCCAAAATGACCCTTCAACCCGTCCAACAATGCGCATAGTGGTTGATATGCTTGAAGGGAAAGTTGAAACCTTGGAAATACCACCAAAACCTTTCTTCTCATCTCCTTCTAGATCATCATGTGATAGCTAG 1860 0.3597 MKTLLLHSYPFFFFIATSIILTNITSHVSANDYTKCYATNTYSCGTITNLTYPFSGGTRPEYCGEPNLKVNCENHVPKFTVNSVTYRIIDWDLKTQNLKVARDDLWDTVCLTSYHATSFENTVFYFNGGLANVTVLLYDCTGNTQPTPNSEDCGGGKYVYYGAGVLPTNYCKSIIVPISGTLAQDVAKDESIIPNTLKDGFELRWDQSYAKCSTCVETGGVCGNNDAQFGCFCNNGTLCQESKKNSRMVMLIATTVSAALVIGVLIIMIYIFRRRLWFHKMNQLWNENSKAHQDFEAFLKTHGPLGIRRYSYIEIKKMTNSFSEKLGQGGYGGVFKGKLHDQRLVAVKMLNKSKGNGDEFINEVASISRTSHINIVTLLGFCYERCKRALIYEYMSNGSLEKFIYQTNPNIVNNQLNWETLYQIAIGVSRGLEYLHKGCNTRIFHFDIKPHNILLDDNFIPKISDFGLAKISPKNESMISMLGARGTPGYIAPEVFSRNIGVVSHKSDVYSFGMMVLEMVGGRKNMSVEVDCTSEIYFPYWIYKRIELNEDIPLKNITNESDEEMMRKMVIVSLWCIQNDPSTRPTMRIVVDMLEGKVETLEIPPKPFFSSPSRSSCDS* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0032 619 ProSiteProfiles Protein kinase domain profile. 320 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0032 619 SMART serkin_6 320 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0032 619 Pfam Protein kinase domain 323 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0032 619 SUPERFAMILY Protein kinase-like (PK-like) 302 595 IPR011009 -
Lan2g0032 619 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Lan2g0032 619 PANTHER RUST RESISTANCE KINASE LR10-RELATED 21 616 IPR045874 GO:0004672
Lan2g0032 619 Pfam Wall-associated receptor kinase galacturonan-binding 43 101 IPR025287 GO:0030247
Lan2g0032 619 Gene3D Transferase(Phosphotransferase) domain 1 395 603 - -
Lan2g0032 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Lan2g0032 619 Gene3D Phosphorylase Kinase; domain 1 295 394 - -
Lan2g0032 619 Pfam Wall-associated receptor kinase C-terminal 168 235 IPR032872 -
Lan2g0032 619 PANTHER - 21 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0032 Lan-Chr2 194329 197590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0032 20 607 Receptor kinase-like Gene Family AT5G38260 39.159 5.42e-138 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lan2g0032 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0032 - - fve:101291631 565.074