Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0006 ATGGAGAAGGTGAATTTTGTTAAGAATGGAGAAGTGAGATTGCCACCAGGGTTCCGTTTCCACCCAACAGATGAGGAATTGGTTGTACAATATTTGAAGCGTAAAGTCTTTTCTTTTCCTTTGCCTGCTTCCATCATTCCTGAGGTTGATGTTTGCAAATCTGACCCTTGGGACTTGCCTGGTGAGTTGGAGGAAGAGAGGTACTTCTTCAGCACAAAGGAAGCCAAATATCCAAATGGGAACAGATCTAACAGAGCTACTAATTCAGGTTACTGGAAGGCAACTGGGTTGGACAAACAAATTGTGACTTCAAAACAAGGTGTGGGTATGAAAAAGACTCTTGTTTTCTATACAGGGAAGCCACCTCATGGTTCCAGAACTGATTGGATCATGCATGAATATCGCCTCCTTAACATCTACACCACTCTCTCTCAGATTCCTATGCAAAATTGGGTTTTATGTCGGATATTTTTGAAGAAGAGAGGTACAACAAAAATAGACATAGGCAAGTTTAACCACAACAAAAAGAACAAGGTGAGGAGGAATAACACTTCAAAGCTGGTTTTCTATGACTTCTTGGCTCAAAAGGACAACAACACAAGTTCATCATCCTCGGATGGAAGTGGAATCACACAGGTTTCAACTTCAATCAATGAATTAGATAAACAACATGAAGGAGATAGCAGTAGCTGCAACAGTTTCCCTTATTCAAGGAGAAAACCTTAA 726 0.405 MEKVNFVKNGEVRLPPGFRFHPTDEELVVQYLKRKVFSFPLPASIIPEVDVCKSDPWDLPGELEEERYFFSTKEAKYPNGNRSNRATNSGYWKATGLDKQIVTSKQGVGMKKTLVFYTGKPPHGSRTDWIMHEYRLLNIYTTLSQIPMQNWVLCRIFLKKRGTTKIDIGKFNHNKKNKVRRNNTSKLVFYDFLAQKDNNTSSSSSDGSGITQVSTSINELDKQHEGDSSSCNSFPYSRRKP* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0006 241 MobiDBLite consensus disorder prediction 199 241 - -
Lan2g0006 241 ProSiteProfiles NAC domain profile. 14 159 IPR003441 GO:0003677|GO:0006355
Lan2g0006 241 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Lan2g0006 241 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
Lan2g0006 241 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 1 240 - -
Lan2g0006 241 Pfam No apical meristem (NAM) protein 15 136 IPR003441 GO:0003677|GO:0006355
Lan2g0006 241 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 240 - -
Lan2g0006 241 MobiDBLite consensus disorder prediction 227 241 - -
Lan2g0006 241 MobiDBLite consensus disorder prediction 199 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0006 Lan-Chr2 35857 37108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0006 1 165 NAC Transcription Factor Family AT5G13180 77.844 3.05e-92 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan2g0006 NAM 1.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0006 - - gmx:100170709 338.961