Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0005 ATGGGTTGGTTTTCATGTTTTGATCCAAGGGATGATGAGAAGCTCAATTCTCATCCTCATCAGAAGCAACAACAAATCCATCATCATCATCTTCGCAAACACCATCCTCCTATACCTTCTCATATTTCCAAACTACCCTCTGGAGCAGACAAGTTAAGATGGAGAAGTAATGGGGGTTCCAAAAAGGAAGCTCCCAATACTATTCATATACCTGGTGTCCAGATTGCTGCTCAGACTTTTACTTTCCGTGAACTCGCTGCCGCTACTAAAAACTTTAGGCCGGAGTCCTTTCTAGGGGAAGGTGGTTTTGGAAGTGTGTACAAAGGGAGACTGGAAAGTAGCAGTCAGACTGTTGCTGTTAAACAGTTAGACAGAAATGGTCTTCAGGGAAATCGTGAATTCCTTGTGGAGGTTCTCATGCTCAGCCTTTTACATCACCCTAATCTTGTGAATCTCATCGGATACTGTGCGGATGGGGACCAACGCCTTCTTGTATATGAATTTATGCCAATGGGATCATTGGAAGATCACCTTCACGACCTTCTCCCGGATAAGGAACCACTAGATTGGAACACTAGGATGAAAATAGCTGCTGGCGCTGCAAAAGGATTAGAATACCTTCATGACAAGGCAAACCCTCCTGTTATTTATCGGGACTTCAAGTCATCTAATATATTACTTGATGAAGGATTTCACCCGAAGCTCTCTGATTTCGGTCTTGCAAAGCTTGGTCCTGTTGGTGACAAGTCCCATGTTTCTACCCGTGTCATGGGAACTTATGGTTACTGTGCTCCCGAGTATGCTATGACTGGACAACTGACTGTGAAGTCTGATGTATACAGTTTTGGTGTTGTCTTACTAGAGCTGATTACTGGTCGTAAAGCGATTGACTGCACCCAGTCCCATGGAGAACAAAATCTTGTCACGTGGGCACGTCCTCTGTTTAACGACCGCCGAAAGTTTTCAAAGTTGGCTGATCCTAAGCTACAAGGGCGGTTTCCCATGCGAGGTCTTTATCAGGCTCTTGCCGTGGCATCTATGTGTATCCAAGAATCGGCTGCCACACGCCCTCTGATCGGAGATGTGGTGACAGCCCTCTCTTATCTGGCCAATCAGGCATATGACACTAAGGGATCCGGTGGCGATGATAAAAGGAATAAAGACGATAAAGGTGGACGGATATTGAAAAACGATGAAGCTGGAGGATCTGGGCACAGATTGGACTTAGAAGGATCCGAGAAAGATGAGTCCCCACGAGAAACTGCAAGGATGTCAGATAGAGAACGTGCTGTGGCTGAAGCCAAGTTGTGGGGAGAGAAATTGAGAGAGAAAAGACGACAAAATGCACTGCCAGGCAGTTTTGATGGCTCCAATGCTTAG 1380 0.458 MGWFSCFDPRDDEKLNSHPHQKQQQIHHHHLRKHHPPIPSHISKLPSGADKLRWRSNGGSKKEAPNTIHIPGVQIAAQTFTFRELAAATKNFRPESFLGEGGFGSVYKGRLESSSQTVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPMGSLEDHLHDLLPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVLLELITGRKAIDCTQSHGEQNLVTWARPLFNDRRKFSKLADPKLQGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQAYDTKGSGGDDKRNKDDKGGRILKNDEAGGSGHRLDLEGSEKDESPRETARMSDRERAVAEAKLWGEKLREKRRQNALPGSFDGSNA* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0005 459 Gene3D Transferase(Phosphotransferase) domain 1 169 391 - -
Lan2g0005 459 MobiDBLite consensus disorder prediction 21 39 - -
Lan2g0005 459 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Lan2g0005 459 ProSiteProfiles Protein kinase domain profile. 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0005 459 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 452 - -
Lan2g0005 459 MobiDBLite consensus disorder prediction 378 431 - -
Lan2g0005 459 Pfam Protein kinase domain 95 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0005 459 Gene3D Phosphorylase Kinase; domain 1 76 168 - -
Lan2g0005 459 CDD STKc_IRAK 98 366 - -
Lan2g0005 459 PANTHER OS07G0668900 PROTEIN 1 452 - -
Lan2g0005 459 MobiDBLite consensus disorder prediction 440 459 - -
Lan2g0005 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Lan2g0005 459 MobiDBLite consensus disorder prediction 13 49 - -
Lan2g0005 459 MobiDBLite consensus disorder prediction 376 431 - -
Lan2g0005 459 SUPERFAMILY Protein kinase-like (PK-like) 66 366 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0005 Lan-Chr2 26214 29135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0005 1 446 Glycoside Hydrolase AT3G07070 56.570 8.61e-169 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lan2g0005 Pkinase 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0005 K13430 - gmx:100305422 732.25