Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1511 ATGGAGAAGAACATTCCAGAACATTCTAGTAGTTTTTCTCATAAGGATGACAACAATAACAACAACATTAACGAGGATAATGTTGTTGATGTTGTTGCTGATGCTAGTGATGGTAAATCACTGTCTGAACCTACAGAAAATGTTGATCATGCAACTGAAAAAGGCGAAGAAAATGTAAAGAATAAAGAAGATGCTGAAAATTCAGATGAAGAAATCAAAAAAACTCAAGAGGATGTTGTTGATGTTGTTGTTGCTGATATTGAAGGAGATGATAAAGAAAAAAAAGAAGAAGAAGTTGTTGCTGATGATGTTCCTCCTGAAACTCCTCCTCCAAGTTTGGAGAAAGTTTCAGAAGACATTGATGCATTTATCATCAATGCAGGAACCATATCATCAAAGGAACCTAATTTCATTCACAAGTTCTTAGATCTTGTTGAAGAAAAGATCTCAAGCTATGACACAGGGAAAACAAAATGGGGTGAATCTAAGGAAGAAGATTCTTTGTTGCTTGAAACAATTGATCGCATTTCAAAGCTGATGAAACTTATACCTGATTCATCACCATTATCAACACAAACCGAAGAAGATGAAGGAAACGAGATCGATGCAAAGAAGGTAAATGAATCGCTTTTGAAGAATCGTGTTGGTGCAATTCATCAACAAGCAATGTCATATTTGGAAGACGAGTTTCGTGTGTTAATGGAGGAACCAAAGAACCACGTAACTGAACATGAACCAAACAAACACGATTCAAAAGGAAAACAAGTAGTTGAACCACAATCATTGGAATCTGAACCTGGTTCAGATTCAGTTCCTAAATTCCCTAATTATGGAGATGAAACAATTTCAAATCTAAACAACATAGCAATGAAAATGATATCAGGTGGTTACAATTCAGAATGCTTCAACATGTATTTCATTTCAAGAAGGCACGCTTTCGAAGAAAACTTACACAAATTAGGGTTAGAGAAGATAAGCATCGACGAGGTTCATAAAATGCAATGGGAAGCATTAGAGAGAGAGATTCCAACCTGGAACAACGTGTTCAAGGAATGCATTTCAATTTACTTCGCCGGAGAGAGGAAACTAGCGGAGGCGGTTTTTTCCGACCACCCAACTACGGCGGCGAGTGTTTTTATGATGGTGTGTCAGCGCGTGGTGATTCAGCTTATTAATTTTGCGGAGGCGGTGGCGATGACGAAGCGTGCGGGGGAGAAGTTATTTAAGTTGTTGGATATGTATGAAACTTTGAGGGACTTAATTGCAAATTTGGATAATTTGTTTCCTGAAGAATGTGTGGATGAGTTGAAAGCTGAAACCTCCTCGGCTAAGTGTAGGCTTGGGGAGTCATCTATTGTTATCTTTTGTGAACTCGAAAACTCGATCAAATCTGATATTGGTAAAACTCCGGTCGCCGGTGGTGCAGTTCATCCACTCACTAGGTACATCATGAACTATTTGAGGTTAGCATGTGAATACAAAGACACATTGGAGGAAGTGTTCAAAGAGCATTCAAAGATAGAGCGTGCAGATTCAACTAGCAGGCCCCATTATGAAGCTGATAACAAAAATGAGAATGAAAAGAGAGAGAATAATGATAATAATAATAAGGACAATGTTTCACCCTTTGCAGCACAATTAATGAGGGTAATGGAATTACTTGACACTAATCTAGATGGTAAGGCAAAGTTATACAAAGATGCTGCATTAAGCAGCATTTTCATGATGAACAATGGAAGGTACATAGTTCAAAAGATTAAAGGGTCACCAGATTTATATGAAGTAATGGGTGAAACATGGTATAGAAAGAGATCTTCAAATTTGAGGACATACCATAAGAACTATCAGATTGAAACATGGAGCAAAATATTGGGTTGCTTGAGCCCTAAGGGATTGAATGATAGTGGGAAAGTACAAAAGCCTGTTCTTAAGGAAAGGTTCAAGAGCTTCAATGCATTGTTTGAAGAGATACATAAGACACAAAGCACATGGGTTGTGAGTGATGAACAACTTCAATCTGAACTTAGGGTTTCTATTTCAGCACTTGTTATTCCAGCTTATAGGTCATTTTTGGGAAGGTTTTCTCAGTATTTGGATCCAGGGAGACAAACAGGGAAGTATATAAAGTTTCAAGCTGAGGATATAGAGACTTATATTGATGAGTTGTTTGATGGAAACCCTCATCATCAATCCCTTGCAAAGAAGAGAGCATGA 2214 0.3776 MEKNIPEHSSSFSHKDDNNNNNINEDNVVDVVADASDGKSLSEPTENVDHATEKGEENVKNKEDAENSDEEIKKTQEDVVDVVVADIEGDDKEKKEEEVVADDVPPETPPPSLEKVSEDIDAFIINAGTISSKEPNFIHKFLDLVEEKISSYDTGKTKWGESKEEDSLLLETIDRISKLMKLIPDSSPLSTQTEEDEGNEIDAKKVNESLLKNRVGAIHQQAMSYLEDEFRVLMEEPKNHVTEHEPNKHDSKGKQVVEPQSLESEPGSDSVPKFPNYGDETISNLNNIAMKMISGGYNSECFNMYFISRRHAFEENLHKLGLEKISIDEVHKMQWEALEREIPTWNNVFKECISIYFAGERKLAEAVFSDHPTTAASVFMMVCQRVVIQLINFAEAVAMTKRAGEKLFKLLDMYETLRDLIANLDNLFPEECVDELKAETSSAKCRLGESSIVIFCELENSIKSDIGKTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFKEHSKIERADSTSRPHYEADNKNENEKRENNDNNNKDNVSPFAAQLMRVMELLDTNLDGKAKLYKDAALSSIFMMNNGRYIVQKIKGSPDLYEVMGETWYRKRSSNLRTYHKNYQIETWSKILGCLSPKGLNDSGKVQKPVLKERFKSFNALFEEIHKTQSTWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTGKYIKFQAEDIETYIDELFDGNPHHQSLAKKRA* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1511 737 Gene3D Exocyst complex component Exo70 159 732 - -
Lan20g1511 737 MobiDBLite consensus disorder prediction 1 115 - -
Lan20g1511 737 MobiDBLite consensus disorder prediction 240 276 - -
Lan20g1511 737 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 83 728 - -
Lan20g1511 737 Coils Coil 58 78 - -
Lan20g1511 737 Pfam Exo70 exocyst complex subunit 345 721 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lan20g1511 737 PANTHER EXOCYST COMPLEX PROTEIN EXO70 83 728 IPR004140 GO:0000145|GO:0006887
Lan20g1511 737 MobiDBLite consensus disorder prediction 240 256 - -
Lan20g1511 737 SUPERFAMILY Cullin repeat-like 167 724 IPR016159 -
Lan20g1511 737 MobiDBLite consensus disorder prediction 506 535 - -
Lan20g1511 737 MobiDBLite consensus disorder prediction 43 102 - -
Lan20g1511 737 MobiDBLite consensus disorder prediction 506 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1511 Lan-Chr20 21961909 21965959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1511 15 736 EXO70 exocyst subunit family AT5G13990 46.958 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1511 K07195 - gmx:100819960 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1044 8 12734686 12738219 Lan20g1511 20 21961909 21965959 LSH
Lan10g1107 10 16291424 16294164 Lan20g1511 20 21961909 21965959 PCT
Lan20g1511 20 21961909 21965959 Lan10g1107 10 16291424 16294164 PCT