Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1503 ATGAAAACAGAAACCTCATCCTCTTGCTCATCGCTCTTTGCTTCAATCATCTTTCTTCTAATAATAATATTCCAACAAATATGTTGCGATGCTAAGCATCATCCACCATGTCCTTCTTCTTCATGCGCCAAAATCACCAATATCACTTCTCCCTTCCGCCTCAAATCTTACCCAAGCTACTGTGGCCAGAAATCATTAGAATTAGATTGTGACAAAAACGGGAGCGTATTAACTTTCTTTTCAGGAAGCTATTACGTTAACAACATCAATTACAGCACATACACAATGAGTTTGAGTGATGCAGGTGTAGTGGAAGATGCAACTTGCTCCTTTATACCTCGCTATTATTTAAACCACAATATCGTATACAAGTTTGGTAGTTTCTATGTACAGTCTTTCGAACCCAGGAACCAAAACTATTCGAGGATTGCATACTTAAACTGTAGAAATCCAGTGATGGATGATCCAAGATATGTGAAAGTGGATATGAATAATAGTTGTGGGTTTGGAGGACATGTGTATGCAGTTTGGATGCAACATATAGATGATTTGAAACCGATGATGATAAAGAGTGAGATTAAGGTTGGGTGTGGTTTGATGGTAGCAACATCTGCAAGTAAAAGGTTGTCGGGTGTAGAATTAAACGGTGGCGTATCTTATAGTGAAATTCATAAGTGGATGGTTGAAGGATTTGAGGTGACGTGGTTCTCTGTGATTTGTGATCAACTATGTGGAAGGAAGGTAGGATGTGAGATTGTGAATGGAGAAGTCAAATGTTTCAACCTGACTTGTGAATGGGAATACGCTACAAACAATTGCGGAATTCTCCAAAATATCAGTAATTACATTCGAGCTTATCTGAGTGGCGTTATAATTGGGATATACCGTAGATTTAGCACAAAGGATTATTTGGGCAAACCATTTCAGAATTTTAGAGATGGAGGAATATTCATGGGACAATATATTCTACCATCTTTAATTGCAATCAGATATTTATTTGGAGTTGTGCTTGTGCTTCTTTTATTGATCTATAGATGGAGAAGAAGACATTTATCAATGTATGAAGAGATTGAACACTTTTTGCTAGACAACAATCTAAATCCCATTAGGTATGAATACAAAGAAATCAAGAAGATGAGTGCAAGTTTCAAAGTGAAATTAGGTCAAGGAGGTTATGGTTCAGTTTATAAAGGAAAGCTACGAAGTGGTCCTGATATAGCAATAAAGATGTTGAATAATAAATTGAATCATAATGGACAAGACTTTATTAGTGAAGTTGCTACCATTGGAAGAATACATCATGTCAATGTGGTGCGTCTTGTTGGATATTGTGTTGAAGGAAAAAAACGTGCTCTCGTCTATGAATTCATGCCTAATGGGTCATTGGATAAATACATATTCTCTAAAGAAGGTTTTGTTTCATTAAGTTATGATAAAATTTATGAAATATCTCTTGGAATAGCTCATGGGATTGCATATCTCCATCAAGGTTGTGATATGCAAATTCTACATTTTGATATAAAGCCTCATAATATTCTTCTAGATGAAAACTTCATCCCTAAAGTTTCTGATTTTGGACTTGCAAAGCTATATTCGGTAGATGATAGCATTGTTACTCTAACTGAAGCAAGAGGAACTTTGGGATACATGGCTCCTGAATTGTTTTATAGAAATGTTGGAGGAGTATCTTATAAGGTTGATGTATATAGCTTTGGGATGCTTTTGATGGAAATGACTAGTAAGAGGAAGAACTCAAATCCAAATGCAGAACGTTCAAGCCTAGTTTACTTCCCCTTTTGGATATATGATCAATTTAATGAAGAAAAAGATATTGAAATGAAAGATTTATGTGAGGAGGAAGATAAGAGTCTAGCAAAAAAGATGTTCATAGTTGCTCTATGGTGTATACAGTTAAAACCTAGTGATCGTCCTTCAATGACAAAGGTGGTAGAGATGCTTGAAGGGGATATTGAAAACCTTCAAATGCCTCCAAAGCCTTCTTTTTATCCACATGAAACTTATCAACATGAAGATGGAATCAACTCTGATGACCAAACATCATGGAGTGATTCCTATAGTTCTGATAGTTATAGGCAAAGTAGTCATGAGTAA 2112 0.3575 MKTETSSSCSSLFASIIFLLIIIFQQICCDAKHHPPCPSSSCAKITNITSPFRLKSYPSYCGQKSLELDCDKNGSVLTFFSGSYYVNNINYSTYTMSLSDAGVVEDATCSFIPRYYLNHNIVYKFGSFYVQSFEPRNQNYSRIAYLNCRNPVMDDPRYVKVDMNNSCGFGGHVYAVWMQHIDDLKPMMIKSEIKVGCGLMVATSASKRLSGVELNGGVSYSEIHKWMVEGFEVTWFSVICDQLCGRKVGCEIVNGEVKCFNLTCEWEYATNNCGILQNISNYIRAYLSGVIIGIYRRFSTKDYLGKPFQNFRDGGIFMGQYILPSLIAIRYLFGVVLVLLLLIYRWRRRHLSMYEEIEHFLLDNNLNPIRYEYKEIKKMSASFKVKLGQGGYGSVYKGKLRSGPDIAIKMLNNKLNHNGQDFISEVATIGRIHHVNVVRLVGYCVEGKKRALVYEFMPNGSLDKYIFSKEGFVSLSYDKIYEISLGIAHGIAYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYSVDDSIVTLTEARGTLGYMAPELFYRNVGGVSYKVDVYSFGMLLMEMTSKRKNSNPNAERSSLVYFPFWIYDQFNEEKDIEMKDLCEEEDKSLAKKMFIVALWCIQLKPSDRPSMTKVVEMLEGDIENLQMPPKPSFYPHETYQHEDGINSDDQTSWSDSYSSDSYRQSSHE* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1503 703 ProSiteProfiles Protein kinase domain profile. 381 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1503 703 Gene3D Transferase(Phosphotransferase) domain 1 457 663 - -
Lan20g1503 703 SUPERFAMILY Protein kinase-like (PK-like) 372 654 IPR011009 -
Lan20g1503 703 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Lan20g1503 703 MobiDBLite consensus disorder prediction 680 703 - -
Lan20g1503 703 Pfam Protein kinase domain 384 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1503 703 MobiDBLite consensus disorder prediction 661 703 - -
Lan20g1503 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Lan20g1503 703 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 12 685 - -
Lan20g1503 703 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Lan20g1503 703 Gene3D Phosphorylase Kinase; domain 1 358 456 - -
Lan20g1503 703 CDD STKc_IRAK 387 655 - -
Lan20g1503 703 SMART serkin_6 381 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1503 703 PANTHER RUST RESISTANCE KINASE LR10-RELATED 12 685 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1503 Lan-Chr20 21878478 21884001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1503 370 687 Receptor kinase-like Gene Family AT5G38280 48.916 3.70e-100 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lan20g1503 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1503 - - lja:Lj0g3v0275229.4 785.793