Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1502 ATGGAAATAGAAACCTCATCCTCTTGCTTATCACTCTTTGCTTCAATCATCTTTCTTCTAATAATAATATTCCAACAAATATGTTGCGATGCTAAGCATCATCCACCATGTCCTTCTTCTTCATGCGCCAAAATCACCAATATCACTTCTCCCTTCCGCCTCAAATCTTACCCAAGCTACTGTGGCCACAAATCATTAGAATTAGATTGCGACAAAAACGGGAGCGTATTAACTTTCTTTTCAGGAAGCTATTACGTTAACAACATCAATTACAGCACATACAAAATCAGTTTAAGTGATGCAGGTGTAGTGGAAGATGCAACTTGCTCCTTTATACCTCGATATTATTTAAACAACTATGATATATTTTTTCAAGATTCATTCTCAATGAAGTACGAAAACTATTCGACGATCGCATACTTAAACTGTAGAAATCCAGTGATGGATGATCCTCGATATGTGAAAGTGGATATGAATAATAGTTGTGGGTTTGAAGGACATGTGTATGCAGTTTGGGAGAGAGAGATGAAAGATTTTGAACCAATGATGAAGAAGAGTGATATTAAGGTTGGGTGTAGTTTGATAGTGGCAACACGGGCAAGTAAAAGGTTGTCGGGTGTAGAATTAAATGGTGGTCTTTCTTATGCTCAAATTCATAAGTGGATGGTTGAAGGATTTGAGGTGTCATGGCTCTATATGATTTGTGATCAATTATGTGGAAGGAACTTAATATGTGAGAGGGTGAATGAATCGAGTGGAGGATTCAAATGTGTCAACAAAATTTGTGATTGGGAATCCTCTACAAGGGACGGTTGCGGAATTGTCAAATTGATCAGTGATCACATTCGAGCTTATCTGGAAGGCGTTATATTTGGAATATACATGTTATTTAGCACAAAGTTTTTCGGCACACAATATTTTCCGATTGATATAGAGGTAGGAATGTTGTTGGGAAAATATATTCTACCACCTTTTGCAATCAGATATTTATTTGGAGTTGTACTTGTGCTTCTTTTATTGATCTATAAATGGAGAAGAAGACATTTATCAATTTATGAAGAGATTGAACATTTTTTGCTAGACAACAATCTAAATCCCATTAGGTATGAATACAAAGAAATCAAGAAGATGAGTGGAAGTTTCAAAGTGAAATTAGGTCAAGGAGGCTATGGTTTAGTTTATAAAGGAAAGTTACGAAGTGGTCCTGATATAGCAATAAAGATGTTGAATAATAAATTAAATCATAATGGACAAGACTTTATTAGTGAAGTTGCTACCATTGGAAGAATACATCATGTGAATGTGGTGCGTCTTGTTGGATATTGTGTTGAAGGAAAAAAACGTGCTCTCGTCTATGAATTCATGCCTAATGGGTCATTGGATAAATACATATTCTCTAAAGAAGGTTTTGTTTCATTAAGTTATGATAAAATTTATGAAATATCTCTTGGAATAGCTCATGGGATTGCATATCTCCATCAAGGTTGTGATATGCAAATTCTACATTTTGATATAAAGCCTCATAATATTCTTCTAGATGAAAACTTCATCCCTAAAGTTTCTGATTTTGGACTTGCAAAGCTATATTCGGTAGATGATAGCATTGTTACTCTAACTGAAGCAAGAGGAACTTTGGGATACATGGCTCCTGAATTGTTTTATAGAAATGTTGGAGGAGTATCTTATAAGGTTGATGTATATAGCTTTGGGATGCTTTTGATGGAAATGACTAGTAAGAGGAAGAACTCAAATCCAAATGCAGAACGTTCAAGCCTAGTTTATTTCCCCTTTTGGATATATGATCAATTTAATGAAGAAAAAGATATTGAAATGGAAGATTTATGTGAGGAGGAAGATAAGAGTCTAGCAAAAAAGATGTTCATAGTTGCTCTATGGTGTATACAGTTAAAACCTAGTGATCGTCCTTCAATGACAAAGGTGGTAAAGATGCTTGAAGGGGATATTGAAAATCTTCAAATGCCTCCAAAGCCTTCTTTCTATCCACATGAAACGTATCAACATGAAGATGGAATCAACTCTGACCAAACATCACAGAGTGATTCCTATAGTTCTGATAGTTATATGCAAAGTAGTCATAAGTAA 2103 0.3495 MEIETSSSCLSLFASIIFLLIIIFQQICCDAKHHPPCPSSSCAKITNITSPFRLKSYPSYCGHKSLELDCDKNGSVLTFFSGSYYVNNINYSTYKISLSDAGVVEDATCSFIPRYYLNNYDIFFQDSFSMKYENYSTIAYLNCRNPVMDDPRYVKVDMNNSCGFEGHVYAVWEREMKDFEPMMKKSDIKVGCSLIVATRASKRLSGVELNGGLSYAQIHKWMVEGFEVSWLYMICDQLCGRNLICERVNESSGGFKCVNKICDWESSTRDGCGIVKLISDHIRAYLEGVIFGIYMLFSTKFFGTQYFPIDIEVGMLLGKYILPPFAIRYLFGVVLVLLLLIYKWRRRHLSIYEEIEHFLLDNNLNPIRYEYKEIKKMSGSFKVKLGQGGYGLVYKGKLRSGPDIAIKMLNNKLNHNGQDFISEVATIGRIHHVNVVRLVGYCVEGKKRALVYEFMPNGSLDKYIFSKEGFVSLSYDKIYEISLGIAHGIAYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYSVDDSIVTLTEARGTLGYMAPELFYRNVGGVSYKVDVYSFGMLLMEMTSKRKNSNPNAERSSLVYFPFWIYDQFNEEKDIEMEDLCEEEDKSLAKKMFIVALWCIQLKPSDRPSMTKVVKMLEGDIENLQMPPKPSFYPHETYQHEDGINSDQTSQSDSYSSDSYMQSSHK* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1502 700 CDD STKc_IRAK 385 653 - -
Lan20g1502 700 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524
Lan20g1502 700 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 13 683 - -
Lan20g1502 700 SMART serkin_6 379 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1502 700 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Lan20g1502 700 MobiDBLite consensus disorder prediction 677 700 - -
Lan20g1502 700 SUPERFAMILY Protein kinase-like (PK-like) 367 652 IPR011009 -
Lan20g1502 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Lan20g1502 700 Pfam Protein kinase domain 382 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1502 700 Gene3D Phosphorylase Kinase; domain 1 357 454 - -
Lan20g1502 700 ProSiteProfiles Protein kinase domain profile. 379 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1502 700 MobiDBLite consensus disorder prediction 659 700 - -
Lan20g1502 700 Gene3D Transferase(Phosphotransferase) domain 1 455 661 - -
Lan20g1502 700 PANTHER RUST RESISTANCE KINASE LR10-RELATED 13 683 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1502 Lan-Chr20 21874134 21876675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1502 326 690 Receptor kinase-like Gene Family AT4G18250 45.093 9.99e-100 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lan20g1502 Pkinase 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1502 - - lja:Lj0g3v0275229.4 783.482