Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1501 ATGGGAATCTGCAATGGAAAACCTCTTGAGACCAAACAAATCACTATAGTAGAAAACAACACAGACAAAGATGTTCTTCCAAGTTCCAACAAAACCAAATCAGCCTCAAAGTTTCCATTCTATAGCCCAAGCCCCTTACCAAGTTGGTTCAAGAACTCACCAGCAAACTCAAACTCAAACTCAAATTCCAACAACAACAGTGTTAGTTCAACTCCAACACCTTTGAGAATCTTCAAGCGCCCTTTCCCTCCTCCTTCACCAGCAAAGCACATTCGGGCATTGCTCGCTCGCCGCCACGGTTCTGTGAAGCCGAATGAGGCATCAATCCCTGAGGGAAGTGAGTGTGAGGTTGTTGGGTTGGATAAGAGTTTTGGATTCTTAAAGCAATTTGTAGTGAATTATGAGCTTAGTGAAGAAGTTGGGCGTGGTCACTTTGGTTATACTTGTTCTGCAATAGGGAAGAAGGGTACCTTGAAGGGACTTGATGTTGCTGTCAAAATCATTCCAAAATCAAAGTTGACAACAGCAATTGCTATAGAGGATGTAAGGAGAGAAGTAAAGATATTGCGTGCTTTAACAGGACATAAGAATCTGGTGCAATTCCATGAAGCCTATGAAGATGATGACAATGTTTTTATAGTTATGGAGTTATGCAAAGGAGGTGAACTTCTGGATAGGATTCTTTCCAGGGGAGGAAAGTACCCGGAAGAGGATGCCAAAGTTGTTATCATTCAAATATTAAGTGCGGTAGCTTTTTGTCATCTCCAGGGTGTTGTTCACCGTGATCTCAAGCCAGAGAATTTTCTTTTTACTTCCAAGGATGAAAGTTCCACATTGTTGAAGGTCATTGATTTTGGATTGTCTGACTATGTAAAGCCAGATGAGAGACTGAATGATATTGTGGGTAGTGCGTATTATGTAGCTCCAGAAGTTTTGCATAGATCTTATGGGACGGAAGCAGATATGTGGAGCATTGGCGTTATTGCTTACATTCTATTATGCGGAAGTCGTCCATTTTGGGCTCGAACAGAATCTGGCATATTTCGGGCTGTCCTGAAGGCAGAACCAAGTTTTGATGAAGCTCCTTGGCCTTCTTTATCAGCTGATGCAATAGATTTTGTAAAGAGGCTGTTGAATAAAGATTATCGTAAAAGATTAACTGCTGCTCAAGCTCTCAGTCACCCATGGCTGGTGAATCATCGCAATGATATGAAGATACCTTTCGATATAATAGTTCACAAGCTTGTTAAAGCTTACATATGCTCATCTTCATTACGTAAATCAGCATTAGGGGCTCTTGCAAAGACATTAACAGTAGCTCAGCTAGCTTATCTCAGAGATCAATTTACTATGTTAGGGCCAAACAAAAGTGGGTTTATCTCTATGCAGAACTTTAAGACGGCTGTTTGGAGGAGCTCCACCGATGCTTCAAATGATTCACGGGTCTTAGATTACGTGAATTCGGTTAGTTCTATCCAATATAGGCAATTAGATTTTGAGGAATTCTGTGCTGCTGCTATAAGTGTGCACCAACTAGAGGGACTGGAGAGCTGGGAGCAACATGCAAGGCGTGCGTATGAGCTTTTTGATAAGGATGGAAATAGACCGATCATGATTGAAGAGCTTGCCTCGGAACTTGGGCTTAGTCCTTCAGTACCTGTTCATGTGGTACTTCAAGATTGGATAAGTCACCCAGATGGGAAGCTTAGTTTCATGGGGTTTGTGAGACTTCTGCATGGGATTTCTTCTCGCACATTTCAGAAGCCTTCACAGAAAACACACGGTTGA 1788 0.4195 MGICNGKPLETKQITIVENNTDKDVLPSSNKTKSASKFPFYSPSPLPSWFKNSPANSNSNSNSNNNSVSSTPTPLRIFKRPFPPPSPAKHIRALLARRHGSVKPNEASIPEGSECEVVGLDKSFGFLKQFVVNYELSEEVGRGHFGYTCSAIGKKGTLKGLDVAVKIIPKSKLTTAIAIEDVRREVKILRALTGHKNLVQFHEAYEDDDNVFIVMELCKGGELLDRILSRGGKYPEEDAKVVIIQILSAVAFCHLQGVVHRDLKPENFLFTSKDESSTLLKVIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKAEPSFDEAPWPSLSADAIDFVKRLLNKDYRKRLTAAQALSHPWLVNHRNDMKIPFDIIVHKLVKAYICSSSLRKSALGALAKTLTVAQLAYLRDQFTMLGPNKSGFISMQNFKTAVWRSSTDASNDSRVLDYVNSVSSIQYRQLDFEEFCAAAISVHQLEGLESWEQHARRAYELFDKDGNRPIMIEELASELGLSPSVPVHVVLQDWISHPDGKLSFMGFVRLLHGISSRTFQKPSQKTHG* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1501 595 SUPERFAMILY Protein kinase-like (PK-like) 123 426 IPR011009 -
Lan20g1501 595 Gene3D Transferase(Phosphotransferase) domain 1 224 416 - -
Lan20g1501 595 Gene3D Phosphorylase Kinase; domain 1 136 223 - -
Lan20g1501 595 SMART serkin_6 134 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1501 595 MobiDBLite consensus disorder prediction 20 39 - -
Lan20g1501 595 MobiDBLite consensus disorder prediction 52 74 - -
Lan20g1501 595 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Lan20g1501 595 ProSiteProfiles Protein kinase domain profile. 134 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1501 595 Gene3D - 423 577 - -
Lan20g1501 595 Gene3D - 418 507 - -
Lan20g1501 595 Pfam Protein kinase domain 134 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1501 595 PANTHER SERINE/THREONINE-PROTEIN KINASE 57 584 - -
Lan20g1501 595 SUPERFAMILY EF-hand 427 580 IPR011992 -
Lan20g1501 595 PANTHER CDPK-RELATED KINASE 1 57 584 - -
Lan20g1501 595 MobiDBLite consensus disorder prediction 52 85 - -
Lan20g1501 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Lan20g1501 595 CDD STKc_CAMK 133 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1501 Lan-Chr20 21866339 21872142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1501 19 587 EF-hand Containing Proteins AT3G50530 67.496 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan20g1501 Pkinase 6.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1501 - - gmx:100796678 983.786