Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1498 ATGGCTAACAGCAACATTAACAAAGAGAGAGACCTTGAGTTTATGTTTGATGAGAACAACGAAGATGAGGATCAGGATATTGAGGATGTGAAGTTTGAGAGTGAGAATAGCAGTGAAGTTGACAGTGATGATGGTCAAGGAAATTATGAAACAAAGCCAGAGTCTTTTACTTCTCAGCAATGGCCTCAAAGTTACAAAGAGACTACAGATTCTTACACAATTGCCACAGCTTCAAATTTGGGATCAATTTTGCGAGGACCGAGTTTTGTTTATTCAAGTTTTCGCAATCGTTCAAAGAGTTACATAGAGATAGATGGAAAGAATCCTTTACTGTCTGGTCAAGAAGGCATTAATCAATCAACATGGTGGGAGAAAGCTTCAATGCGAAGGCTTGTTTCTGAAGAATTGCCCATTGGTTATGGATGCAGCTTCACTCAAACAGTTTTCAATGGGATTAATGTGATGTGTGGAGTTGGCCTTCTGTCCACTCCTTATACAGTGAACCAAGCTGGTTGGGCAAGTATGGGTGTGATGCTACTTTTTGCAGTTATTTGTTGTTATACAGCCACCCTTATGAGAGACTGCTTTGAAAGCAGAGAAGGAATCGTTAGCTACCCAGATATTGGAGAAGCAGCATTTGGAAAATTCGGCCGTATTTTTGCATCAATCATTTTGTACACCGAATTATTTACATATTGTGTGGAGTTCATCATCTTGGAAGGAGATAACCTCACTAGTGTTTTTCCTGGAACATCGTTGAATTTGGGTAGTTTCAAGTTAGACTCTGTGCACTTGTTTGGGATTGTGACTGCATTTATTGTTCTCCCTACTGTTTTGTTGAAGGATATCCGCATAATCTCATACCTATCAGCTGGAGGGGTTATTGCAACACTTTTGATTGTTATATGTGTGATTAGTGTTGGAACAATAGGTGGTGTTGGATTCCATCACACTGGTGAAGTGGTGAATATGAGTGGAATCCCATTTGCTATTGGTATTTATGGATTTTGCTATGCAGGACACTCAGTTTTTCCAAATATTTACCAGTCTATGGCTGATAAAAGACAATTTACCAAGGCAGTAATAACATGTTTTGTTTTGTGCATTTTGTTATATGGAGGTGTTGCAATCATGGGATTTCTGATGTTTGGGGATGCCACTTTGTCTCAGATAACATTGAATATGCCAGCAGGTTCATTTGCTTCCAAAGTTGCAGTGTGGACAACAATAATCAACCCATTCACCAAATATGCTTTGTTGTTAAACCCACTGGCAAGGTGTCTAGAGGAGTTGCTTCCACATAGAATTTCGACTACTTATTGGTGTTTCGTTCTTATCAGAACAGTGCTTGTTGCATCTACAGTTTGTGCTGCATTTCTGATTCCCTTTTTCGGGCTTGTGATGGCTCTGATTGGCTCTCTCTTCAGTATACTTGTGTCGGTGATAATGCCAAGTTTATGTTTTCTGAAAATTGTGGGTAAAAAAGCTACAAATACACAGGTGACACTGAGCATCGTAATTGCTATATTGGGAATCATTTGTGGAGTCCTTGGAACATATTCCTCTGTGTCAAATATTGTGAATAGTTACTAA 1593 0.3917 MANSNINKERDLEFMFDENNEDEDQDIEDVKFESENSSEVDSDDGQGNYETKPESFTSQQWPQSYKETTDSYTIATASNLGSILRGPSFVYSSFRNRSKSYIEIDGKNPLLSGQEGINQSTWWEKASMRRLVSEELPIGYGCSFTQTVFNGINVMCGVGLLSTPYTVNQAGWASMGVMLLFAVICCYTATLMRDCFESREGIVSYPDIGEAAFGKFGRIFASIILYTELFTYCVEFIILEGDNLTSVFPGTSLNLGSFKLDSVHLFGIVTAFIVLPTVLLKDIRIISYLSAGGVIATLLIVICVISVGTIGGVGFHHTGEVVNMSGIPFAIGIYGFCYAGHSVFPNIYQSMADKRQFTKAVITCFVLCILLYGGVAIMGFLMFGDATLSQITLNMPAGSFASKVAVWTTIINPFTKYALLLNPLARCLEELLPHRISTTYWCFVLIRTVLVASTVCAAFLIPFFGLVMALIGSLFSILVSVIMPSLCFLKIVGKKATNTQVTLSIVIAILGIICGVLGTYSSVSNIVNSY* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1498 530 MobiDBLite consensus disorder prediction 1 63 - -
Lan20g1498 530 Gene3D Amino acid/polyamine transporter I 141 529 - -
Lan20g1498 530 MobiDBLite consensus disorder prediction 41 63 - -
Lan20g1498 530 MobiDBLite consensus disorder prediction 16 30 - -
Lan20g1498 530 PANTHER OS05G0424000 PROTEIN-RELATED 36 528 - -
Lan20g1498 530 Pfam Transmembrane amino acid transporter protein 143 522 IPR013057 -
Lan20g1498 530 PANTHER AMINO ACID TRANSPORTER AVT1A 36 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1498 Lan-Chr20 21844220 21847826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1498 1 465 Amino Acid or Auxin Permease AAAP Family AT2G41190 62.917 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1498 K15015 - gmx:100790344 815.068