Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1496 ATGAACAACATTTTATTCATGCACAAGAATAGTGTTAGCTCCAAAGAACTTGGAAAGAGAAGAACATATTCTTCAATGGCTGCAATCTCCGAAACTTCGAATCGCCGTAACTCGATGATTCCAAGCTTCCTCTATTCTCCTTCTTCATTACCGAAGATGATAAATTCCTCCACAATTTCTATAGCAGAATCTCCTTCTGGGTTCATGGTTGCTTCTCCGAATGAACCATCTCGGAAAATCGAGATGTATTCATCGGCTTTCTATGGTGCTTGTGCAGTTGGTGGAACTCTAAGTTGTGGCCTTACTCATACAGCAGTTACTCCTCTTGATGTTATCAAATGTAATATGCAGATTGATCCAGCAAAATACAAGAGCACATCCTCTGGATTTGGAATAGTGTTTAAGGAACAGGGTCTAAGGGGTTTTTATAGGGGTTGGGCACCAACATTTATTGGTTATAGTGCACAAGGTGCATTTAAATATGGACTATATGAGTATTTTAAGAAATATTATTCTGATATTGCTGGTCCTGAATATGCAACAAAGTATAAGACCTTCATCTACCTTGCTGGTTCAGCATCTTCTGAGTTTATTGCAGATGTTGCACTTTGTCCATTAGAGGCTATCAAAGTTAGAGTTCAAACTCAACCTGGTTTTGCTAGAGGACTCTCTGATGGCTTTCCAAAAATTGTTAAATCTGAAGGACTTTTAGGATTGTACAGGGGAATTGTGCCTTTGTGGGGAAGACAAGTTCCATATACAATGATGAAGTTTGCTTCTTATGAGACCATTGTTGAGATGATATATAAGCATGCCATTCCTACACCTAAAGATGAATGTAGCAAAACTCTTCAACTTGGAGTTAGTTTTGGTGGTGGATACATAGCTGGTATATTATGTGCACTTGTGTCTCATCCTGCTGATAACCTTGTTTCTTTCCTCAACAATTCAAAAGGGGCAACAGTTGGTGATGCTGTAAAGAACCTCGGATTATGGGGTCTCTTTACGCGCGGCCTCCCGCTTCGTATTCTTATGATTGGAACACTCACTGGATCTCAGTGGCTAATCTATGATTCATTCAAAGTTTTTGTAGGACTGCCAACCACCGGTGGTGTCGCTCCTGCTTCTGTTCCTACTCCTACTCCTATTCCTACTCCGGATTCTGCTACTTAG 1173 0.4041 MNNILFMHKNSVSSKELGKRRTYSSMAAISETSNRRNSMIPSFLYSPSSLPKMINSSTISIAESPSGFMVASPNEPSRKIEMYSSAFYGACAVGGTLSCGLTHTAVTPLDVIKCNMQIDPAKYKSTSSGFGIVFKEQGLRGFYRGWAPTFIGYSAQGAFKYGLYEYFKKYYSDIAGPEYATKYKTFIYLAGSASSEFIADVALCPLEAIKVRVQTQPGFARGLSDGFPKIVKSEGLLGLYRGIVPLWGRQVPYTMMKFASYETIVEMIYKHAIPTPKDECSKTLQLGVSFGGGYIAGILCALVSHPADNLVSFLNNSKGATVGDAVKNLGLWGLFTRGLPLRILMIGTLTGSQWLIYDSFKVFVGLPTTGGVAPASVPTPTPIPTPDSAT* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1496 390 ProSiteProfiles Solute carrier (Solcar) repeat profile. 183 267 IPR018108 -
Lan20g1496 390 Gene3D Mitochondrial carrier domain 87 365 IPR023395 -
Lan20g1496 390 Pfam Mitochondrial carrier protein 90 172 IPR018108 -
Lan20g1496 390 Pfam Mitochondrial carrier protein 184 271 IPR018108 -
Lan20g1496 390 SUPERFAMILY Mitochondrial carrier 90 358 IPR023395 -
Lan20g1496 390 ProSiteProfiles Solute carrier (Solcar) repeat profile. 86 170 IPR018108 -
Lan20g1496 390 PANTHER PHOSPHATE CARRIER PROTEIN 33 376 - -
Lan20g1496 390 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 33 376 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1496 Lan-Chr20 21651551 21654915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1496 36 375 Chloroplast and Mitochondria Gene Families AT5G14040 71.468 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1496 K15102 - gmx:548006 570.081