Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1475 ATGGAAGAGCCTATTGTGGTGAACAAAGGAGAAGAATCTCTAGATTTGCCTCCAGGTTTCAGGTTCCACCCAACAGATGAAGAAATCATCACTTATTATCTCACAAAGAAAGTGTTAAATAACAATTTTAGTGCAATTGCTATGGGTGAAGCTGATTTCAACAAGTGTGAGCCTTGGGACTTGCCTAAGAAAGCCAAGATGGGAGAGAAAGATAATTGGTTTTTCTTTTGCCAAAGAGATAGAAAATATCCAACAGGTATGAGAACAAATCGTGCTACACAATCAGGGTATTGGAAAGCCACTGGAAAAGATAAGGAAATATACAAAGGGAATGATAACTTGGTTGGGATGAAAAAGACCCTTGTTTTCTATAGAGGGAGAGCTCCAAAGGGTGAGAAAACCAATTGGGTTATACATGAATTCAGATTAGAAGGCAAATATGCAAATTATAACCTCCCTAAAGTTGCAAAGGATGAATGGGTTGTTTCCAGGGTTTTTCATAGGAACACAGATGTTAGAAAAATCCCTCCTTTTAGGATGAACTCAATTGGTGATGATTTTCTTGATTTTTCTTCACTACCACTTCTCATGGATCCTCCTTATGGCACTAACCAACCATCTTCATCATCAGATAATCACTATGTTCCAAACTTCATCAATAACAATAATCAAAACCAGAATATGCTAATGAAGCTAGAAGAGGATAGAACCTATGAGATTCCTAATCCTAGCAATAATAACCAATGGAATTATTGCACTAATGGTAGTTCAATAATGTTGACCACAGTTTCTCAGCCTCAACAGAACATGATCTCAGATTATTATGTGCACCAAGGAAATAATAAAGAAAACATGTCTCTATTATTGAACAACATGCAGTGCAAAATGGAACAATTCTCTTCTAATAATCAATCTATGGTAAGTGTTTCTCAAGAAACATGCCTCAGCAATGACAGAAACACTGACACAACATCTTCGGTGGTTTCTAAGCATGACAATATAGGAAGGAACAATAATGGAGCATTGTACGAGGATCTTGAAGTTCCATCATCAGATTTGGAATGCATGTGGGATAATTCTCACTACAGATTATAA 1095 0.3662 MEEPIVVNKGEESLDLPPGFRFHPTDEEIITYYLTKKVLNNNFSAIAMGEADFNKCEPWDLPKKAKMGEKDNWFFFCQRDRKYPTGMRTNRATQSGYWKATGKDKEIYKGNDNLVGMKKTLVFYRGRAPKGEKTNWVIHEFRLEGKYANYNLPKVAKDEWVVSRVFHRNTDVRKIPPFRMNSIGDDFLDFSSLPLLMDPPYGTNQPSSSSDNHYVPNFINNNNQNQNMLMKLEEDRTYEIPNPSNNNQWNYCTNGSSIMLTTVSQPQQNMISDYYVHQGNNKENMSLLLNNMQCKMEQFSSNNQSMVSVSQETCLSNDRNTDTTSSVVSKHDNIGRNNNGALYEDLEVPSSDLECMWDNSHYRL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1475 364 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 339 - -
Lan20g1475 364 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100-LIKE 3 339 - -
Lan20g1475 364 Gene3D NAC domain 25 173 IPR036093 GO:0003677|GO:0006355
Lan20g1475 364 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Lan20g1475 364 SUPERFAMILY NAC domain 12 168 IPR036093 GO:0003677|GO:0006355
Lan20g1475 364 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1475 Lan-Chr20 21480438 21482740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1475 1 358 NAC Transcription Factor Family AT5G18270 52.381 2.43e-111 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan20g1475 NAM 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1475 - - gmx:100784372 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1022 8 12192277 12194286 Lan20g1475 20 21480438 21482740 LSH