Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1453 ATGGTAGAACGAAAAGAGTGCAACTTCAACGAGCCTCGACTCCTTCAATGCGCAGATCTCATTCTCCCATACCTAACCCCACCAGAACTCGCCAACATCTCCATCACATGCAAATCCCTCTTCGAAATCGCAACCTCCATCACTCTCCTTCGAATTTCCGATGCTTCTAGAACCTTCGAGAATCTTCCAATCCCATTCCTCAATACCACACTCGATAACCACCCTTACTCCTACTTCCTCTACACTCCTTCCCTAACCCTCGCTTCAAATCTCCAACGTCAGGTTTGGGGGGGCACTTCGGTAATTTCACGTCCGAGTCGAGCGGTTTTGGAATCGGTGAGTGTGGTCGACGAGTTGGGGAGGAAGGTGTCGGGTTGCGAGTGCGAGGATTGTGGAGGTTTGGGTTCGGGTTTAGGTTCGGAGTGTGGCTGTTTAGGGTTGGATGGGTTGGGTGAGTTGGGGAGTGAGTGTGGACCGGGTTGTTTGTGTGGACCGGAGTGTGTGAACCGGTTTACGCAGAACGGGGTTGCGGTTCGGGTGAAGATTGTGAGAGATAGGAGGAAAGGGTGGTGTTTGTATGCTGACCAGTTTATAAGGAAAGGCCAGTTCTTGTTTGAGTATGCAGGTGAACTCTTGACAACCAAGGAAGCACAAAGGAGACATCAATACTATGATGAGCTTAGATTGCATGGTTGTTTCTCTTCTGCCCTTTTGGTCGTAAGGGAGCATCTTCCATCCGGTAAGGCTTGTTTGAGATTGAACATTGATGCCACAAGAATAGGTAATGTTGCACGATTTGTTAATCATTCATGTGATGGTGGTAATTTAAGCACAAAGCTAGTTAGAAGTTCAGGACTTTTGTTCCCCCGCCTTTGCTTCTATGCTTTGAAAGATATCCAAGAAGATGAGGAGCTTACTTTTAGCTATGGAGAAATCAGGAAAAAGGCCGATGGCTTGCCGTGCTTTTGCAACAGCTCTTCTTGCTTTGGAATATTGCCCTCAGAAGACACTTAA 1014 0.4753 MVERKECNFNEPRLLQCADLILPYLTPPELANISITCKSLFEIATSITLLRISDASRTFENLPIPFLNTTLDNHPYSYFLYTPSLTLASNLQRQVWGGTSVISRPSRAVLESVSVVDELGRKVSGCECEDCGGLGSGLGSECGCLGLDGLGELGSECGPGCLCGPECVNRFTQNGVAVRVKIVRDRRKGWCLYADQFIRKGQFLFEYAGELLTTKEAQRRHQYYDELRLHGCFSSALLVVREHLPSGKACLRLNIDATRIGNVARFVNHSCDGGNLSTKLVRSSGLLFPRLCFYALKDIQEDEELTFSYGEIRKKADGLPCFCNSSSCFGILPSEDT* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1453 337 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 12 326 - -
Lan20g1453 337 Pfam SET domain 189 310 IPR001214 GO:0005515
Lan20g1453 337 ProSiteProfiles Post-SET domain profile. 317 333 IPR003616 -
Lan20g1453 337 SUPERFAMILY SET domain 61 330 IPR046341 -
Lan20g1453 337 ProSiteProfiles SET domain profile. 178 310 IPR001214 GO:0005515
Lan20g1453 337 Gene3D SET domain 36 318 IPR046341 -
Lan20g1453 337 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 12 326 - -
Lan20g1453 337 SMART set_7 178 316 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1453 Lan-Chr20 21275487 21278772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1453 156 332 C2H2 Transcription Factor Family AT2G23740 32.086 9.41e-22 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lan20g1453 SET 4.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1453 K11433 - gmx:100786871 422.165