Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1446 ATGGTGTACTGCGATCATTGTTTGAGAAATGTTACGGGGGAAAGAGAATTCGACGGTTCCTTATCTTGTGACATATGTGGGAAGTTACTTGAAGACTTTATTTTTTCTCAGGAGCCTACTTTTACGAAAAATGCGTCCGGTCAGAGCCAACTATCAGGCCATTATGTAAGAACAATTCAAAGCGAGTTCTCTGCTTCACGCCAAAGGACTTTAGACAGAGCTTTAGATGAAATCATATATTTAAGTAGCAGCCTTGGAGTGGATGATGTTAATGTCCCCCACCAAGCTTTGGCATTTTATAAAATAGCACTTGAGCGGAATTTTACAAGGGGACGTAAATCAGAGCAAGTACAGGCTGCTTGTCTTTATATTGCATTCCGGGAAAATAACAAGCCATACCTTCTTATTGACTTTTCAAATCATTTAAGGACAAATGTCTATGTGCTAGGTGCAGTTTTTTTGCAGCTTTGTAAAGTATTAAGGCTCGAAGAGCACCCAATTGTTCAAAAACCTGTTGATCCCAGTCTTTTTATTTATAAATATACGAATAATTTGTTAAAGCAAAGAAACCTGGCTGTCTCTGAAACTGCGCTGAGTATTATTGCCAGCATGAAACGTGACTGGATGCAGACAGGTAGGAAGCCAAGTGGATTATGTGGCGCGGCATTGTACATGTCTGCTCTTGCACATGGTTTTAAGTGCTCTAAGCCAGATATTTTAAGAATCGTCCATGTATGTGAAGCAACATTGACTAAGCGGTTGGTAGAGTTTGAGAATACAGAGTCTGCTAGCTTGACAATTGAGGAGTTGAATACGATGGCAAAAGAGCATGAAAAGATTCCTATTAAAATACCAAATGGTGAACTGAGCAAAGGTACTTCAAAATATCTACTATGCGAACACAAGGATAGTGCTGAGCCCTACTTCGCACTTGGATTATGTGAAACATGTTATAAGGATTTTGATAAACTCTCTGGCGGACTTAGTGGTGGTTTGGATCCTCCTGCATTCCAGCGTGCTGAGAGGGAGAGAGTGACAAACTCACCTGCTGAGCAAGGTGCCAATAAATCAGATAATTTGGTGAAAGCATCCAATGGTGCATGCAGGAACAAAAAAGAAGACTTCCATGCCTCGGAGCCAGAAAGTATTGGGGCTGATGATGAGCATGTGGCTGTTAAAGATGACAAACATATGGAAGATGATATGAACAAAAAGTCTTGTCATGATTCTCAGGAATCAGAGACTCTCTCGGACATTGATGACCAGGAGGTTGATGGCTACATTCACAATGAGGAGGAAAAGTATTACAAGAAGATTATATGGGAAAAAATGAACAGAGAGTATCTTGAGGAACAAGCAGCGAAGCAGGCAGTTGAAGAAGCTGCTAAGAAAGCTTTTGAGGCGAGTTTTGAAGGTCCGGCTGATTTGCTAGCAGAGAGAGCATCTGTTGCTGCAGCTGTGGCAAATTTGAGAAAGGAAACAAGACAGAAACGAGCTCAAGAAGCGAAAAATTTAGGACCTGCTCAATCTGCTGTTGAGGCCACTCGCCAAATGTTGAGAACGAAGAGGCTCAGCTCCAAAGTCAATTATGACCGCTTGCAAAACTTATTTGACGAACGTGAGGCTCCAGAGAATCCCAAGAAAGTACGATTTGATCTACCCTCTGATAATCATGACAAAATGGAGTCTAAGGTAGAGGAGAAACTGAAGGATGATGAGCCGGTATTAGCAGATGAAACCGAGGATGGTGATATTGACGGAGATTATGAAAATGTGGACGAGACATATGGCTATGCAGATGATGGTTATAACTATGAGGGTGGTGGTTATAATAACTATGATGATGATTACTGA 1854 0.4132 MVYCDHCLRNVTGEREFDGSLSCDICGKLLEDFIFSQEPTFTKNASGQSQLSGHYVRTIQSEFSASRQRTLDRALDEIIYLSSSLGVDDVNVPHQALAFYKIALERNFTRGRKSEQVQAACLYIAFRENNKPYLLIDFSNHLRTNVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIYKYTNNLLKQRNLAVSETALSIIASMKRDWMQTGRKPSGLCGAALYMSALAHGFKCSKPDILRIVHVCEATLTKRLVEFENTESASLTIEELNTMAKEHEKIPIKIPNGELSKGTSKYLLCEHKDSAEPYFALGLCETCYKDFDKLSGGLSGGLDPPAFQRAERERVTNSPAEQGANKSDNLVKASNGACRNKKEDFHASEPESIGADDEHVAVKDDKHMEDDMNKKSCHDSQESETLSDIDDQEVDGYIHNEEEKYYKKIIWEKMNREYLEEQAAKQAVEEAAKKAFEASFEGPADLLAERASVAAAVANLRKETRQKRAQEAKNLGPAQSAVEATRQMLRTKRLSSKVNYDRLQNLFDEREAPENPKKVRFDLPSDNHDKMESKVEEKLKDDEPVLADETEDGDIDGDYENVDETYGYADDGYNYEGGGYNNYDDDY* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1446 617 SMART cyclin_7 176 259 IPR013763 -
Lan20g1446 617 SMART cyclin_7 76 158 IPR013763 -
Lan20g1446 617 MobiDBLite consensus disorder prediction 576 595 - -
Lan20g1446 617 CDD CYCLIN 193 248 IPR013763 -
Lan20g1446 617 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 541 IPR000812 GO:0006352|GO:0070897
Lan20g1446 617 MobiDBLite consensus disorder prediction 537 575 - -
Lan20g1446 617 MobiDBLite consensus disorder prediction 340 362 - -
Lan20g1446 617 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 1 541 IPR029529 GO:0000126|GO:0000995|GO:0006383
Lan20g1446 617 MobiDBLite consensus disorder prediction 537 617 - -
Lan20g1446 617 Gene3D - 64 165 - -
Lan20g1446 617 PRINTS Transcription initiation factor IIB signature 16 36 IPR000812 GO:0006352|GO:0070897
Lan20g1446 617 PRINTS Transcription initiation factor IIB signature 119 138 IPR000812 GO:0006352|GO:0070897
Lan20g1446 617 PRINTS Transcription initiation factor IIB signature 213 229 IPR000812 GO:0006352|GO:0070897
Lan20g1446 617 SUPERFAMILY Cyclin-like 172 269 IPR036915 -
Lan20g1446 617 Gene3D - 173 265 - -
Lan20g1446 617 MobiDBLite consensus disorder prediction 348 362 - -
Lan20g1446 617 Pfam Transcription factor TFIIB repeat 170 259 IPR013150 GO:0017025
Lan20g1446 617 Pfam Transcription factor TFIIB repeat 68 157 IPR013150 GO:0017025
Lan20g1446 617 SUPERFAMILY Cyclin-like 74 163 IPR036915 -
Lan20g1446 617 Gene3D Single helix bin 410 460 - -
Lan20g1446 617 Pfam Brf1-like TBP-binding domain 417 538 IPR011665 -
Lan20g1446 617 CDD CYCLIN 74 143 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1446 Lan-Chr20 21218850 21232776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1446 1 522 Inorganic Solute Cotransporters AT2G01280 41.527 4.29e-109 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1446 K15196 - gmx:100789154 723.776