Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1442 ATGGAAGATCAGGGTCAAGGACCCAATAGTCCAAGCCAAGGTTCTGAGAAAAGTGAACCTGTAAGGTCAAGATGGACTCCTAAGCCAGAACAAATCCTCATACTTGAATCCATCTTCAACAGTGGAATGGTGAATCCACCAAAAGATGAAACTGTTAGAATAAGAAAACTTCTTGAGAAGTTTGGTGCTGTTGGTGATGCTAATGTCTTCTACTGGTTCCAGAACCGCCGTTCACGGTCACGCCGCCGCCAACGGCAGATGCAGGCTAACCTTGAACAAAGGAATAACCAGCTTCAGGCTCAAGTTGGCGGTGGTGCAAATCCATATCATCATCATCACCATCATCAAGTTTCTTCTGCTATGGATTTTGGTGGTTCATCTTCTTCTTTCATTGGTTCTTCTCCATCTTATATCTCTGGTTCCTCTTCATCATGTGGTGGCCAAGGAGGATTTGGTGGTTTTTTCTCAGCCTCTTCTCAAATGGGGTTTTCTGAAATTGATCATAGTTCAGCTGCACCATCAGTTTTGTTCCCTTCTTGTGATGCTGCAAATTTGAACTACCAATCTGGATTTGGGGGGACAAGTATTTCAGCAGTGATCACTGTTTTTATCAATGGGGTTGCAACAGAAGTTCCAAGTGGACCATTTGACATAAAAACTGTGTTTGGTGAAGATGTTATGTTAGTTCATTCTTCAGGAGTGTCAGTTCCAACCAATGAATTTGGTCTCTTGATGCAGAGTTTGAGCCATGGAGAAAGCTACTTTCTGGTTTCAAAGCAAGCACAAATATGA 792 0.4268 MEDQGQGPNSPSQGSEKSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMQANLEQRNNQLQAQVGGGANPYHHHHHHQVSSAMDFGGSSSSFIGSSPSYISGSSSSCGGQGGFGGFFSASSQMGFSEIDHSSAAPSVLFPSCDAANLNYQSGFGGTSISAVITVFINGVATEVPSGPFDIKTVFGEDVMLVHSSGVSVPTNEFGLLMQSLSHGESYFLVSKQAQI* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1442 263 Coils Coil 81 101 - -
Lan20g1442 263 Pfam Homeodomain 22 82 IPR001356 GO:0003677
Lan20g1442 263 ProSiteProfiles 'Homeobox' domain profile. 18 83 IPR001356 GO:0003677
Lan20g1442 263 PANTHER WUSCHEL-RELATED HOMEOBOX 11 2 260 - -
Lan20g1442 263 MobiDBLite consensus disorder prediction 101 121 - -
Lan20g1442 263 MobiDBLite consensus disorder prediction 1 20 - -
Lan20g1442 263 Gene3D - 7 100 - -
Lan20g1442 263 PANTHER WUSCHEL-RELATED HOMEOBOX 11 2 260 IPR044558 GO:0003700|GO:0048830
Lan20g1442 263 MobiDBLite consensus disorder prediction 1 27 - -
Lan20g1442 263 SMART HOX_1 20 87 IPR001356 GO:0003677
Lan20g1442 263 SUPERFAMILY Homeodomain-like 15 89 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1442 Lan-Chr20 21135395 21137957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1442 3 263 Wox Gene Family AT3G03660 48.763 3.09e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lan20g1442 Homeodomain 1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1442 - - lang:109335690 437.187