Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1441 ATGAGTTCATATAGCTTCAACAATGGTGGTTATGGTTCCTATGGGTACCTATCCAGAGCCTCTATTGGTTCTTCAGTTGTTCTTGTTCCCCAACAACCTCTCTTGACTAACCCTTTTGGTTTGATGGATCCACCACAAGAGGTTGAAGTTGAAGCTAGGGATTCTTCTGTTGCTGCTGAGAAAAATAAACTTTGTGCTAGAGGTCATTGGAGACCCACTGAAGATGCTAAACTCAAAGAGCTTGTTGCTCAATATGGTGCTCAAAACTGGAATTCCATTGCTGATCATTTTGATGGAAGATCGGGAAAAAGCTGCAGATTGAGGTGGTTTAATCAACTTGATCCTAGAATCAAAAGAGGTGCTTTCACTGAAGATGAAGAAACAAGGTTGATATATGCTCATAGTTTATATGGTAATAAATGGGCTTTGATTTCTAGGCTTTTCCCTGGGAGAACAGATAATGCAGTGAAGAATCATTGGCATGTTATGAATGCTAGGTGGCAGAGAGAGGAGTCAAATTACTATAGGAGAAACAATCCCTACCTTTTAAGGGATTTGAGTCTAAATAACAGTGTTGCTAGTGGATTAACAACCACAAGTACCATCAATGAAGCTGCATCAACCTGCACCAACATCACCCTCAACCCCTCTTTAGGGACACCAAATTTCAGGCCCTTTTATAATTATGATAATAATTATAGTTATAATTATAACTATAATTATAATTATAACAACTTGGGTCAAGCTGAGAATCATGCTAATGGGTCTCAAATGGGTTTATCTGGAGAAAGGAGGGTACAAACTGAGCATGTTGGTTTTGGCAAGATTTTTGGTGCTTGGAATGGTTCAGGTCAGATTGGACCCATAAGAAGGCCCAATTATTCAGATACAAACTCAGAAGTCTCAGTTGGCACCACCACCAATATCTCATTTTATGCTGAAAATGAAAACATGGTTAATAAGAGTCAAGTGCATTTCATTGACTTTCTTGGAGTAGGAGATGCATAG 1008 0.3899 MSSYSFNNGGYGSYGYLSRASIGSSVVLVPQQPLLTNPFGLMDPPQEVEVEARDSSVAAEKNKLCARGHWRPTEDAKLKELVAQYGAQNWNSIADHFDGRSGKSCRLRWFNQLDPRIKRGAFTEDEETRLIYAHSLYGNKWALISRLFPGRTDNAVKNHWHVMNARWQREESNYYRRNNPYLLRDLSLNNSVASGLTTTSTINEAASTCTNITLNPSLGTPNFRPFYNYDNNYSYNYNYNYNYNNLGQAENHANGSQMGLSGERRVQTEHVGFGKIFGAWNGSGQIGPIRRPNYSDTNSEVSVGTTTNISFYAENENMVNKSQVHFIDFLGVGDA* 336
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1441 335 SUPERFAMILY Homeodomain-like 67 160 IPR009057 -
Lan20g1441 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 113 IPR017930 -
Lan20g1441 335 PANTHER OS08G0435700 PROTEIN 54 334 - -
Lan20g1441 335 Gene3D - 121 163 - -
Lan20g1441 335 SMART sant 66 115 IPR001005 -
Lan20g1441 335 SMART sant 118 166 IPR001005 -
Lan20g1441 335 CDD SANT 121 163 IPR001005 -
Lan20g1441 335 Pfam Myb-like DNA-binding domain 67 113 IPR001005 -
Lan20g1441 335 Pfam Myb-like DNA-binding domain 119 161 IPR001005 -
Lan20g1441 335 Gene3D - 67 118 - -
Lan20g1441 335 PANTHER MYB PROTEIN-RELATED 54 334 - -
Lan20g1441 335 CDD SANT 70 111 IPR001005 -
Lan20g1441 335 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 168 IPR017930 -
Lan20g1441 335 ProSiteProfiles Myb-like domain profile. 114 164 IPR001005 -
Lan20g1441 335 ProSiteProfiles Myb-like domain profile. 67 113 IPR001005 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan20g1441 Lan-Chr20 21113039 21115264 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1441 63 230 MYB Transcription Factor Family AT5G17800 58.989 3.81e-65 207
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan20g1441 Myb_DNA-binding 6e-15 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1441 K09422 - gmx:100791795 265.003