Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan20g1441 | ATGAGTTCATATAGCTTCAACAATGGTGGTTATGGTTCCTATGGGTACCTATCCAGAGCCTCTATTGGTTCTTCAGTTGTTCTTGTTCCCCAACAACCTCTCTTGACTAACCCTTTTGGTTTGATGGATCCACCACAAGAGGTTGAAGTTGAAGCTAGGGATTCTTCTGTTGCTGCTGAGAAAAATAAACTTTGTGCTAGAGGTCATTGGAGACCCACTGAAGATGCTAAACTCAAAGAGCTTGTTGCTCAATATGGTGCTCAAAACTGGAATTCCATTGCTGATCATTTTGATGGAAGATCGGGAAAAAGCTGCAGATTGAGGTGGTTTAATCAACTTGATCCTAGAATCAAAAGAGGTGCTTTCACTGAAGATGAAGAAACAAGGTTGATATATGCTCATAGTTTATATGGTAATAAATGGGCTTTGATTTCTAGGCTTTTCCCTGGGAGAACAGATAATGCAGTGAAGAATCATTGGCATGTTATGAATGCTAGGTGGCAGAGAGAGGAGTCAAATTACTATAGGAGAAACAATCCCTACCTTTTAAGGGATTTGAGTCTAAATAACAGTGTTGCTAGTGGATTAACAACCACAAGTACCATCAATGAAGCTGCATCAACCTGCACCAACATCACCCTCAACCCCTCTTTAGGGACACCAAATTTCAGGCCCTTTTATAATTATGATAATAATTATAGTTATAATTATAACTATAATTATAATTATAACAACTTGGGTCAAGCTGAGAATCATGCTAATGGGTCTCAAATGGGTTTATCTGGAGAAAGGAGGGTACAAACTGAGCATGTTGGTTTTGGCAAGATTTTTGGTGCTTGGAATGGTTCAGGTCAGATTGGACCCATAAGAAGGCCCAATTATTCAGATACAAACTCAGAAGTCTCAGTTGGCACCACCACCAATATCTCATTTTATGCTGAAAATGAAAACATGGTTAATAAGAGTCAAGTGCATTTCATTGACTTTCTTGGAGTAGGAGATGCATAG | 1008 | 0.3899 | MSSYSFNNGGYGSYGYLSRASIGSSVVLVPQQPLLTNPFGLMDPPQEVEVEARDSSVAAEKNKLCARGHWRPTEDAKLKELVAQYGAQNWNSIADHFDGRSGKSCRLRWFNQLDPRIKRGAFTEDEETRLIYAHSLYGNKWALISRLFPGRTDNAVKNHWHVMNARWQREESNYYRRNNPYLLRDLSLNNSVASGLTTTSTINEAASTCTNITLNPSLGTPNFRPFYNYDNNYSYNYNYNYNYNNLGQAENHANGSQMGLSGERRVQTEHVGFGKIFGAWNGSGQIGPIRRPNYSDTNSEVSVGTTTNISFYAENENMVNKSQVHFIDFLGVGDA* | 336 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan20g1441 | 335 | SUPERFAMILY | Homeodomain-like | 67 | 160 | IPR009057 | - | |
Lan20g1441 | 335 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 113 | IPR017930 | - | |
Lan20g1441 | 335 | PANTHER | OS08G0435700 PROTEIN | 54 | 334 | - | - | |
Lan20g1441 | 335 | Gene3D | - | 121 | 163 | - | - | |
Lan20g1441 | 335 | SMART | sant | 66 | 115 | IPR001005 | - | |
Lan20g1441 | 335 | SMART | sant | 118 | 166 | IPR001005 | - | |
Lan20g1441 | 335 | CDD | SANT | 121 | 163 | IPR001005 | - | |
Lan20g1441 | 335 | Pfam | Myb-like DNA-binding domain | 67 | 113 | IPR001005 | - | |
Lan20g1441 | 335 | Pfam | Myb-like DNA-binding domain | 119 | 161 | IPR001005 | - | |
Lan20g1441 | 335 | Gene3D | - | 67 | 118 | - | - | |
Lan20g1441 | 335 | PANTHER | MYB PROTEIN-RELATED | 54 | 334 | - | - | |
Lan20g1441 | 335 | CDD | SANT | 70 | 111 | IPR001005 | - | |
Lan20g1441 | 335 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 114 | 168 | IPR017930 | - | |
Lan20g1441 | 335 | ProSiteProfiles | Myb-like domain profile. | 114 | 164 | IPR001005 | - | |
Lan20g1441 | 335 | ProSiteProfiles | Myb-like domain profile. | 67 | 113 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan20g1441 | Lan-Chr20 | 21113039 | 21115264 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan20g1441 | 63 | 230 | MYB Transcription Factor Family | AT5G17800 | 58.989 | 3.81e-65 | 207 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Lan20g1441 | Myb_DNA-binding | 6e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan20g1441 | K09422 | - | gmx:100791795 | 265.003 |