Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1432 ATGGATCATTACAAGATTCTAGGTTTACACAAAACCGCATCAAAAGCAGAAATCAAAACAGCGTTCAAGAAATTAGCCTTTCAATTTCACCCAGACAAGCATTCTCAATCTCCCAAATCCGTTAGAGACACCGCTACTCTTCGATTCAAACAAGTTTCCGAGGCCTATGAAGTTCTCATGGACGATCGCAAACGCGCCGATTACAATATTCGATTTCGCTCCGGCGCCACCGGTTACGGTGGTGGTGGCGGTGGTGGTGGTGGTTATTATAGTTCTTATGGTTATGGATATGGTAGGAGTGGGAGTGGTTATGAATCTTCTAGGTATAAGAATTCTGCTACGTCTAGGTTTAGTGGTGGTGGATTTGCGTCGAAGTTTGAGATTGTTATGAGGATTTTGACGGCGAGATCTTCTCTTCTCAATCTTGGTTTTGCAGCGGCTATTTTAGGTTCAATAGTTGTCATCAATACAAGTAGAGAATCCTTGTGGAATATGCAAAATTCTGGGAAATCTTTTGAAGAAGCCATGAAGTCCATTGAGAAAGCCAAAGCATACAGAGAAGAAAACACGAAGGAGCATCCTTGA 585 0.4239 MDHYKILGLHKTASKAEIKTAFKKLAFQFHPDKHSQSPKSVRDTATLRFKQVSEAYEVLMDDRKRADYNIRFRSGATGYGGGGGGGGGYYSSYGYGYGRSGSGYESSRYKNSATSRFSGGGFASKFEIVMRILTARSSLLNLGFAAAILGSIVVINTSRESLWNMQNSGKSFEEAMKSIEKAKAYREENTKEHP* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1432 194 CDD DnaJ 2 61 IPR001623 -
Lan20g1432 194 Pfam DnaJ domain 2 69 IPR001623 -
Lan20g1432 194 PANTHER CO-CHAPERONE PROTEIN DJLA 1 177 - -
Lan20g1432 194 PANTHER CHAPERONE PROTEIN DNAJ 72 1 177 - -
Lan20g1432 194 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Lan20g1432 194 Gene3D DnaJ domain 1 131 IPR036869 -
Lan20g1432 194 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Lan20g1432 194 PRINTS DnaJ domain signature 4 22 IPR001623 -
Lan20g1432 194 PRINTS DnaJ domain signature 22 37 IPR001623 -
Lan20g1432 194 PRINTS DnaJ domain signature 44 64 IPR001623 -
Lan20g1432 194 PRINTS DnaJ domain signature 64 83 IPR001623 -
Lan20g1432 194 SUPERFAMILY Chaperone J-domain 1 96 IPR036869 -
Lan20g1432 194 SMART dnaj_3 1 64 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1432 Lan-Chr20 20985665 20990639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1432 3 69 C2H2 Transcription Factor Family AT1G74250 40.299 9.31e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1432 - - lang:109336420 333.183