Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1431 ATGGGGTCTCAAAATGGGGCAATACAAGAGCCAAAGATTGCACCTTTGGCTAGGGAAGGTTCATTGTGTAATCTAACCCTTGATGAGGTACAGAACCACCTTGGGAATTTGGGAAAACCACTTGGTAGCATGAATCTAGATGAGTTGCTTAAGAGTGTGTGGAGTGCTGAAGTTGGTAGTGATGTGGCCTCCGGGTTGGATTTTAGTGGTGGTGCTAATAACAAGCAGCAGCATGGTGAGCTTGTTTCGGGGTCGTCTTTGAACCCGCAGGGTAGTTTAACGTTATCGGGCGATCTTTGCAAGAAAACCGTTGATGAGGTTTGGAAAGATATGCAGATGAAAAAAGGCGGTGATAGGGGTAGGGAAGCTCGGGAGAGATGTCCTACATTGGGTGAGATGACTTTGGAGGACTTCTTAGTGAAGGCTGGAGTGGTTACTGATTCTTTTCCTACGAAGGATGTCGGTGGTGGTGGTGGTGCTATGTCAGGGATTGATTCAAATGGGGCTTCCGAGAAAAATGCTTCACAACATGGTAATTGGTTGCAATACCAACATCAACATCAAAATCTGCAGGATAATATGATGGTTGGCTTTGTGGCTGGTAATGCCATTCAACAGCCTTTCCAGGTTGCGGTGAATCCGATTTTGGATGCAGCATACTCTAAAACAATGGCGACAATGTCACCATCGGATACACAAACTCTAGGCCGGAAAAGGGTTGCCTCTGGCAATGTAGTGGTAGAGAAAACTGTGGAGCGGAAGCAGAAGAGGATGATTAAAAATAGGGAATCTGCAGCTCGGTCAAGGGCAAGAAAACAGGCTTACACCCAAGAACTGGAGATTAAAGTTTCACGTTTGGAAGAGGAGAATGAAAGGCTTAGAAGACAGTGTGAGATAGAGAAGGTATTGCCATGCGCGCCACCACCGGACCCTAAGCACCAGCTTCGCAGAACAGGTTCGGCAACCTTTTGA 972 0.4671 MGSQNGAIQEPKIAPLAREGSLCNLTLDEVQNHLGNLGKPLGSMNLDELLKSVWSAEVGSDVASGLDFSGGANNKQQHGELVSGSSLNPQGSLTLSGDLCKKTVDEVWKDMQMKKGGDRGREARERCPTLGEMTLEDFLVKAGVVTDSFPTKDVGGGGGAMSGIDSNGASEKNASQHGNWLQYQHQHQNLQDNMMVGFVAGNAIQQPFQVAVNPILDAAYSKTMATMSPSDTQTLGRKRVASGNVVVEKTVERKQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLRRQCEIEKVLPCAPPPDPKHQLRRTGSATF* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1431 323 PANTHER BZIP TRANSCRIPTION FACTOR 2 321 - -
Lan20g1431 323 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 321 IPR043452 GO:0003700|GO:0045893
Lan20g1431 323 CDD bZIP_plant_BZIP46 253 307 - -
Lan20g1431 323 Gene3D - 251 303 - -
Lan20g1431 323 Coils Coil 269 303 - -
Lan20g1431 323 MobiDBLite consensus disorder prediction 304 323 - -
Lan20g1431 323 Pfam bZIP transcription factor 253 297 IPR004827 GO:0003700|GO:0006355
Lan20g1431 323 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 256 271 IPR004827 GO:0003700|GO:0006355
Lan20g1431 323 SUPERFAMILY Leucine zipper domain 253 299 IPR046347 GO:0003700|GO:0006355
Lan20g1431 323 MobiDBLite consensus disorder prediction 69 89 - -
Lan20g1431 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 251 296 IPR004827 GO:0003700|GO:0006355
Lan20g1431 323 MobiDBLite consensus disorder prediction 156 176 - -
Lan20g1431 323 SMART brlzneu 249 306 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1431 Lan-Chr20 20979563 20983266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1431 1 323 bZIP Transcription Factor Family AT3G56850 55.077 8.21e-102 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan20g1431 bZIP_1 2.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1431 K14432 - gmx:100170741 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1004 8 11834726 11837720 Lan20g1431 20 20979563 20983266 LSH