Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1420 ATGAATGAATCAATGGATGCATCATCAATTCCTCACTTCTCAGGTCTACGTCTCGATTCTCTCATTCCTTCTTCTTCTTCAACTTCTTCTTCAATTTCCACTCCTTCTTCTCCTCATCTTCTTCAACCTCGTTTCCCTTCTTCTCCACTCCATTCATCATCAACCTTGATTCCGAATCAACCCTTCGTTATAGGTGTTTCTGGAGGTACTGCTTCTGGTAAAACCACTGTTTGTGATATGATCATTCAACAGCTTCATGATCATCGCGTTGTTCTCGTTAATCAAGATTCGTTTTATCGTGGGTTGACACCTGAAGAGTTGGAGCATGCGCACGAGTACAATTTTGACCATCCCGATGCTTTTGATACTCATCAACTATTAGAGTGCATGGGAAAGCTCATAAGTGGTCAAAGTGTTCAACTCCCAATTTACGACTTTAAGAAGCACCAACGCTCCACAGATAGCTTCCGGCAGGTCAATGCCTCTGATGTCATTATATTGGAGGGGATTCTTGTTTTCCATGATCAAGATGTTCGGGATTTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTAGACGTGATACAGTGGAAAGGGGCAGGGATATAAACTCTGTTCTTGAACAGTATGCCAAGTTTGTTAAGCCTGCCTTTGATGATTTTATTCTTCCATCAAAGAAGTATGCTGATGTGATCATTCCCAGAGGAGGTGATAATCATGTTGCTGTTGATCTGATCGTGCAACATATTCACACAAAACTTGGCCAACATGATCTATGCAAGATATATCCAAATGTGTATGTTATTCAGTCAACATTTCAGATAAGGGGCATGCACACATTGATTCGTGACCAAGACATATCAAAGCATGATTTTGTATTTTATTCAGATCGGCTTATACGTCTGGTTGTTGAGCATGGCCTTGGTCATTTTCCATTCACTGAAATGCAAGTAGTTACTCCAACAGGGTCTGTCTACACAGGTGTTGACTTCTGCAAGAAATTGTGCGGTGTTTCAATTATTCGAAGTGGTGAGAGCATGGAAAATGCACTTCGAGCTTGTTGTAAAGGCATTAAAATTGGAAAAATTCTGATTCATCGGGATGGAGACAATGGAAAACAGCTTATATATGAGAAGCTTCCCAAGGATATTTCAGAACGACATGTCTTGCTTCTTGACCCTGTCCTGGCCACAGGTAACTCTGCCAATCAAGCAATTGAGTTACTCATTCAGAAAGGAGTTCCTGAATCACACATTATATTCCTGAATCTCATATCTGCTCCCGAGGGAATCCACTGCGTGTGTAAAAAGTTTCCTTCGTTGAAAATTGTCACATCTGAGATTGATCATGCATTAAATGAAGAGTTTCGGGTTATCCCAGGATTGGGTGAGTTTGGTGATCGCTACTTTGGTACTGATGATTGA 1449 0.4092 MNESMDASSIPHFSGLRLDSLIPSSSSTSSSISTPSSPHLLQPRFPSSPLHSSSTLIPNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEELEHAHEYNFDHPDAFDTHQLLECMGKLISGQSVQLPIYDFKKHQRSTDSFRQVNASDVIILEGILVFHDQDVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFILPSKKYADVIIPRGGDNHVAVDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDQDISKHDFVFYSDRLIRLVVEHGLGHFPFTEMQVVTPTGSVYTGVDFCKKLCGVSIIRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKKFPSLKIVTSEIDHALNEEFRVIPGLGEFGDRYFGTDD* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1420 482 Pfam Uracil phosphoribosyltransferase 279 480 - -
Lan20g1420 482 CDD UMPK 63 261 IPR000764 -
Lan20g1420 482 SUPERFAMILY PRTase-like 264 481 IPR029057 -
Lan20g1420 482 Gene3D - 265 480 IPR029057 -
Lan20g1420 482 PRINTS Uridine kinase signature 61 78 - -
Lan20g1420 482 PRINTS Uridine kinase signature 91 102 - -
Lan20g1420 482 PRINTS Uridine kinase signature 136 151 - -
Lan20g1420 482 PRINTS Uridine kinase signature 193 203 - -
Lan20g1420 482 PRINTS Uridine kinase signature 207 218 - -
Lan20g1420 482 PRINTS Uridine kinase signature 229 242 - -
Lan20g1420 482 MobiDBLite consensus disorder prediction 24 53 - -
Lan20g1420 482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 254 IPR027417 -
Lan20g1420 482 Pfam Phosphoribulokinase / Uridine kinase family 63 249 IPR006083 GO:0005524|GO:0016301
Lan20g1420 482 Gene3D - 58 264 IPR027417 -
Lan20g1420 482 PANTHER URIDINE KINASE 14 479 - -
Lan20g1420 482 CDD PRTases_typeI 338 453 IPR000836 -
Lan20g1420 482 PANTHER URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC 14 479 IPR029930 GO:0004849|GO:0044206
Lan20g1420 482 TIGRFAM udk: uridine kinase 61 261 IPR000764 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1420 Lan-Chr20 20863823 20870174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1420 1 482 PRT Gene Family AT5G40870 84.025 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1420 K00876 - gmx:100780005 829.706