Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan20g1414 | ATGACGGTTTTCTCCGCCGGAAATCAGTTTAATCCGGTGAACTACGTGGCCGAGGTGTCACAGCGCCTTCTAGAAGCTTCTCACTCCGGCGATCTCATTTCCGCCTTGAACTGCATTGCCGATCCCTTCGTCGACGTCAACTTCGTCGGCGTTGTCACTTTGAGGACACGAAGGACTGAGTTAGTTCTTTTCAACGAATCGCCGAGTCAGGTCCGAGTGGAGTTCGATGAGTTCAAATCCGATGTCACGCCTTTGTTCCTCGCTGTTCATGCAGGGAATGCGAAACTCGTGAGGAAGTTACTGAATGTGGGAGCTGATGTAAACCAGAAGCTTTTCAGAGGCTTTGCAACAACTGCGGCAGTGAGGGAAGGCCACCTTGATATTCTTCAGATATTACTCAAAGCTGGGGCATCACAGGCAGCATGTGAAGAAGCTCTTTCGGAGGCAAGCTGTCATGGACATGCAGAGCTTGCAGAATTGCTCATGAGCTCTGAATTGATCCGACCCCATATAACTGTACACGCTTTGGTGACTGCATGCTGTAGGGGATTCATAGATGTCATTCAGACACTCATAAAGTGTGGTGTGGATGTGAGTGCCACAGACCGTTTGCTTTTACAGTCAATTAAGCCTTCTCTCCACACAAATGTGGATTGTACTGCACTTTTTGCTGCTGTAATTCACAGACAGATCTCTGTCGTTTGTTTGCTGTTGAAGAATGGTGCTAGGTTAGACTATGAAGCAAGGCTTGGAGCATGGTCATGGGACATGTCAACGGGTGAAGAGATTCGTGTGGGAGCTGGGCTGGGAGAATGCTATCCTATCACCTGGTGTGCAGTTGAGTATTTTGAAAAGAGTGGTGATATACTGCTCATGCTCTTGCATCACGTCTCCCACAACGCTCCTCACTGTGGAAGAACCCTTCTGCACCATGCTATCCTCTGTGGCAATATTGAGGCTGTTAGGATACTCTTAGAATATGGTGTGGATGTGGAATCGCCTGTCAAAACAACTACCTGTCAGACAAAGTTTCATCCAATACACATGGCTTCTCGTCTTGGCTTATCAACTATTGTTCAATGTCTTATTGATTTCGGTTGCAATTTGAACTCTACAACAGACGCTGGTGATACAGCTTTGATGATATGTGCAAAATATAAACAAGAGAAGTGTTTCAACGTACTGACAAGTGCTGGTGCTGATTTTGGCATAGTGAATACTGCTGGACAATCTGTTTGTTCAATTGCTGAGTCAACACATTGGTGGCTTGGTTTTCAGCAAGCAGTGTTGCATACAATCCGAAATGGAAAGATACCCAAATCCAGAAATCCTTCAGCTTTCTCCCCCATAATGTTTGCCGCACAAGTTGGGGATGCCGAATCTTTGAAAATGGTCATTGGTTCTGGAGAATTTGATCTTGACTACCAAGATGATAATGGTTTTTCTGCAGTTATGGTTACTGCTTTGAAGGGTCATGTGGAATCATTCCGATTGCTTGTATATGCTGGAGCTGATATAAGCTTGTGCAATAAAGCAGGAGAAACAACACTAACCCTATCTGAATTTAATCCTAGATCTGATTTATTTGAAAAGGTAATGCTTGAATTTGCACTTCATAAGAGAAACTGCAATGTGGGTGGCTTTTATGCTTTACATTATGCAGCTCGTGACGGTAACTTGAATGCTGTAAAATTGCTCACTAGTAAGGGTTATGATGTGAATGCCTTTGATGGTGGCCACTACACTCCCCTAATGTTAGCAGCAAGGGAAGGCCACAGGTCCATTTGCGAGCTTCTAATTTCGAATGGAGCCAACTGCAATGCTAAGAATACCAGAGGGGAAACTGCACTTTCACTTGCAAGAAACAAAGGAATGAAAAACGACGCAGAGGCTGTTATACTCGATGAACTTGCTCGTAGATTAGTATTAGGTGGTGCGTATGTTCAGAAGCATACTAAAGGAGGAAAGGGATCCCCACACGAGAAACATTTACAAATGTTAGAATCCAAACGTGTGCTTCGTTGGGGAAAATCTGGCCGCAAAAATGTTATGTGTTGTGAGGCAGAGTTGGGGCCAAGCTCAACATTCCGTAGAAATCGGTATAATAAAGGTGATGTTGATGAACCTGGAATGTTTAGGGTGCTTACAAAAACAAACAAGGAAGTGCATTTTGTATGTGATGGAGGATTAGAAGTTGCTGAGCTTTGGGTGAGAGGTATTAAACTTGTAAAGTAG | 2235 | 0.4421 | MTVFSAGNQFNPVNYVAEVSQRLLEASHSGDLISALNCIADPFVDVNFVGVVTLRTRRTELVLFNESPSQVRVEFDEFKSDVTPLFLAVHAGNAKLVRKLLNVGADVNQKLFRGFATTAAVREGHLDILQILLKAGASQAACEEALSEASCHGHAELAELLMSSELIRPHITVHALVTACCRGFIDVIQTLIKCGVDVSATDRLLLQSIKPSLHTNVDCTALFAAVIHRQISVVCLLLKNGARLDYEARLGAWSWDMSTGEEIRVGAGLGECYPITWCAVEYFEKSGDILLMLLHHVSHNAPHCGRTLLHHAILCGNIEAVRILLEYGVDVESPVKTTTCQTKFHPIHMASRLGLSTIVQCLIDFGCNLNSTTDAGDTALMICAKYKQEKCFNVLTSAGADFGIVNTAGQSVCSIAESTHWWLGFQQAVLHTIRNGKIPKSRNPSAFSPIMFAAQVGDAESLKMVIGSGEFDLDYQDDNGFSAVMVTALKGHVESFRLLVYAGADISLCNKAGETTLTLSEFNPRSDLFEKVMLEFALHKRNCNVGGFYALHYAARDGNLNAVKLLTSKGYDVNAFDGGHYTPLMLAAREGHRSICELLISNGANCNAKNTRGETALSLARNKGMKNDAEAVILDELARRLVLGGAYVQKHTKGGKGSPHEKHLQMLESKRVLRWGKSGRKNVMCCEAELGPSSTFRRNRYNKGDVDEPGMFRVLTKTNKEVHFVCDGGLEVAELWVRGIKLVK* | 745 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan20g1414 | 744 | Pfam | Ankyrin repeat | 304 | 331 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | ProSiteProfiles | Ankyrin repeat profile. | 479 | 511 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | PANTHER | ANKYRIN REPEAT-CONTAINING | 6 | 743 | - | - | |
Lan20g1414 | 744 | Gene3D | - | 13 | 172 | IPR036770 | - | |
Lan20g1414 | 744 | SUPERFAMILY | Ankyrin repeat | 78 | 253 | IPR036770 | - | |
Lan20g1414 | 744 | ProSiteProfiles | Ankyrin repeat profile. | 546 | 578 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | PANTHER | ANKYRIN DOMAIN PROTEIN | 6 | 743 | - | - | |
Lan20g1414 | 744 | Gene3D | - | 420 | 530 | IPR036770 | - | |
Lan20g1414 | 744 | Gene3D | - | 265 | 338 | IPR036770 | - | |
Lan20g1414 | 744 | ProSiteProfiles | Ankyrin repeat region circular profile. | 479 | 511 | - | - | |
Lan20g1414 | 744 | SUPERFAMILY | Ankyrin repeat | 302 | 633 | IPR036770 | - | |
Lan20g1414 | 744 | PRINTS | Ankyrin repeat signature | 305 | 320 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | PRINTS | Ankyrin repeat signature | 595 | 609 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | ProSiteProfiles | Ankyrin repeat profile. | 304 | 336 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | ProSiteProfiles | Ankyrin repeat region circular profile. | 579 | 610 | - | - | |
Lan20g1414 | 744 | Pfam | Ankyrin repeats (3 copies) | 535 | 610 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | Pfam | Ankyrin repeats (3 copies) | 85 | 164 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | ProSiteProfiles | Ankyrin repeat region circular profile. | 304 | 332 | - | - | |
Lan20g1414 | 744 | SMART | ANK_2a | 111 | 141 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | SMART | ANK_2a | 375 | 404 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | SMART | ANK_2a | 304 | 333 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | SMART | ANK_2a | 171 | 200 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | SMART | ANK_2a | 579 | 608 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | SMART | ANK_2a | 342 | 371 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | SMART | ANK_2a | 546 | 575 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | SMART | ANK_2a | 445 | 475 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | SMART | ANK_2a | 479 | 508 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | SMART | ANK_2a | 80 | 109 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | SMART | ANK_2a | 217 | 246 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | ProSiteProfiles | Ankyrin repeat profile. | 579 | 611 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | Gene3D | - | 339 | 419 | IPR036770 | - | |
Lan20g1414 | 744 | ProSiteProfiles | Ankyrin repeat region circular profile. | 546 | 577 | - | - | |
Lan20g1414 | 744 | ProSiteProfiles | Ankyrin repeat region circular profile. | 80 | 108 | - | - | |
Lan20g1414 | 744 | Gene3D | - | 173 | 264 | IPR036770 | - | |
Lan20g1414 | 744 | Gene3D | - | 531 | 638 | IPR036770 | - | |
Lan20g1414 | 744 | ProSiteProfiles | Ankyrin repeat profile. | 342 | 374 | IPR002110 | GO:0005515 | |
Lan20g1414 | 744 | ProSiteProfiles | Ankyrin repeat profile. | 80 | 112 | IPR002110 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan20g1414 | Lan-Chr20 | 20807569 | 20812152 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan20g1414 | 452 | 673 | Ion Channels | AT4G32500 | 27.928 | 4.27e-08 | 55.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan20g1414 | - | - | gmx:100777347 | 1103.97 |