Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1410 ATGAAATCTTTCTCCACAATTCAATCACCCCACCTTTTCTCTTTCACAAGATTTTACACTTCCATAACCACTAGGACTAGATTTACTTTTCCGGCAAAGCTCTTCTTTTGCCAGGCAAAATCTGTAGGCTTCCACTCAGGCACAGATGGGTCGTTAAACATAAAAGTGGTTCCTACGACTCTGTTCGCAGCAGAAAAGGAAGAAGCCAGGGCTGTATTGACCTTGTTTTTCAAGAAACTGGGCTTGAGCACTGCAATTGCAGCAAGAATCATCAACAAGTCGGATCTATTTATTGATCACCTTCTCGCTAAGCTTCATCAGAAACACAAATCTCGGTACCTCGTAGGGAGAGAGCTTACAACTCTTGAGATCAGGGATGCTCTTAATACTTTTCTTGATTCCCTTCTTGAAGAGCATGGAAACAATCTAGTGCGTGTAGTGGAATACTATCCGGACCCACCTGGTAAGGAACAATCAACTGTTCTGCCGATCCCTCCTCCTCCTCGTCCAACTTTGGAGTCTAAGAAGCATAAAGCTGTGTCTCGAGTGAGTGAGATAGATCCGTTTGCTGGCAAGCTTCGCCCTCATATTGCTTATCTGATGGAGCTTGGTATGGAAATTGAGCAGATCAGAACTATTGTACGACGATTCCCATCTTTTGTTTACTATAGCTTGGAGGGTAAAATTAAGCCGGTGGTTGAGTTTTTCCTTGAGCTAGGAATACCAAAAGAAGACATCCCCACCATCCTCGCCAAAAGGCCTCAATTATGCGGAATCAGTCTATCTGAAAACCTTAAACCCACCATGAAGTTCTTAGAATCTTTAGGTGTTGACAAGAAGCAATGGGCAAAGGTCATCTATCGCTTCCCAGCCCTTCTCACTTATAGCAGGCAGAAGTTGAAGGAAAGCGTAGATTTCCTCCAAGAAATCGGCATCTCAGATGAGAGCATAGGTAAAATTTTAACTCGGTGCCCCAATATTGTTAGTTACAGTGTAGAGGACAATCTCCGGCCCACAGCTAAGTACTTCCGTTCTTTGGGGTCTTCATTTAGTAGTTTTGCACATATGATTCTAAATGTGCCTCAAGAAATGATAGTCATCTTTGTAAATGAAAGCCTGAATCACCCTAATTCATTTGTGTATGTATATTTTCATGCACTTCCCAACTTAGAATAA 1176 0.4243 MKSFSTIQSPHLFSFTRFYTSITTRTRFTFPAKLFFCQAKSVGFHSGTDGSLNIKVVPTTLFAAEKEEARAVLTLFFKKLGLSTAIAARIINKSDLFIDHLLAKLHQKHKSRYLVGRELTTLEIRDALNTFLDSLLEEHGNNLVRVVEYYPDPPGKEQSTVLPIPPPPRPTLESKKHKAVSRVSEIDPFAGKLRPHIAYLMELGMEIEQIRTIVRRFPSFVYYSLEGKIKPVVEFFLELGIPKEDIPTILAKRPQLCGISLSENLKPTMKFLESLGVDKKQWAKVIYRFPALLTYSRQKLKESVDFLQEIGISDESIGKILTRCPNIVSYSVEDNLRPTAKYFRSLGSSFSSFAHMILNVPQEMIVIFVNESLNHPNSFVYVYFHALPNLE* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1410 391 MobiDBLite consensus disorder prediction 157 177 - -
Lan20g1410 391 SMART mt_12 211 242 IPR003690 GO:0003690|GO:0006355
Lan20g1410 391 SMART mt_12 247 278 IPR003690 GO:0003690|GO:0006355
Lan20g1410 391 SMART mt_12 283 313 IPR003690 GO:0003690|GO:0006355
Lan20g1410 391 SMART mt_12 318 349 IPR003690 GO:0003690|GO:0006355
Lan20g1410 391 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 24 351 - -
Lan20g1410 391 PANTHER CGI-12 PROTEIN-RELATED 24 351 IPR003690 GO:0003690|GO:0006355
Lan20g1410 391 Gene3D Transcription termination factor 3, mitochondrial 255 379 IPR038538 -
Lan20g1410 391 Pfam mTERF 196 364 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan20g1410 mTERF 1.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1410 K15032 K12177 gmx:100781900 509.605