Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1397 ATGAGTTCTTCTTCTTCTTCCATGATCTTTCTACTTTTTCTTCTCTTGCCCATTTTTTCTTGTCTCCAACATTTCTCAATGGCTTCCTTTGATTTTCAAGTTGGTGGCACAAAAGGGTGGATTGTTCCACCTCCTAATGACACCAATATATACAATGATTGGGCTTCTAACAATAGGTTCCAACTTGGTGATACCATTTATTTTAGTTACAAGAAGGACTCAGTGATGGAGGTGAGTGAGAGAGATTACAAGGAATGCAATGCAACTCACCCAACATTCTTTTCCAACATTGGCAACACTGTGTTCAAGTTGGAACACTCAAGAACATTCTACTTCATAAGTGGTGCATCAGGGCACTGTGAGAAGGGACAAAAAATGATTTTAAGGGTCATGGTTCAGGATGAACATGCTAAATCCTATGGGTACCATGATGCTATTACAACATATGGTGTCTTTGGAATGGTTTCTTTCACTTTGTTTTGGAATGTGTTGATTCCTTTGTAA 504 0.3849 MSSSSSSMIFLLFLLLPIFSCLQHFSMASFDFQVGGTKGWIVPPPNDTNIYNDWASNNRFQLGDTIYFSYKKDSVMEVSERDYKECNATHPTFFSNIGNTVFKLEHSRTFYFISGASGHCEKGQKMILRVMVQDEHAKSYGYHDAITTYGVFGMVSFTLFWNVLIPL* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1397 167 Pfam Plastocyanin-like domain 49 124 IPR003245 GO:0009055
Lan20g1397 167 SUPERFAMILY Cupredoxins 30 131 IPR008972 -
Lan20g1397 167 PANTHER EARLY NODULIN-LIKE PROTEIN 21 10 133 - -
Lan20g1397 167 PANTHER BLUE COPPER PROTEIN 10 133 IPR039391 GO:0009055
Lan20g1397 167 Gene3D - 29 136 IPR008972 -
Lan20g1397 167 CDD OsENODL1_like 30 131 IPR041846 -
Lan20g1397 167 ProSiteProfiles Phytocyanin domain profile. 30 132 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1397 Lan-Chr20 20679059 20680362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1397 14 131 Phytocyanin Superfamily AT1G48940 55.833 9.84e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1397 - - lang:109346935 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0190 5 2295797 2296949 Lan20g1397 20 20679059 20680362 LSH