Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1380 ATGAAAGACGAATCAAGAAGAGCTGAAGCGGAACGCTTACTAGGGATTGCAGAAGATTTCTTAAAGAATCGTGATCTTAATGGTTCAAGGGATTTCGCCATTCTAGCCCAGGAAATCGAACCCCTTGTCGAAGGTTCGGATCAAGTCTTGGCTATTGTTGATGTTATCTCTGCAGCACATAAACCTCTCAATGGTAGCATTGAGTGGTACACAATCCTTCAAGTTGATCTATTGTGTCAAGATATCGATCTTATAAAAAGGAATTATCGAAGATTGGCCCTTTTCCTCCACCCAGATAAGAATTATTTCACTTTAGCTGACTTCGCTTTTAAATTGGTTTCTGATGCATGGGAACATTTATCTGATCCAATTAAGAAAGCTGAGTATGATTATAACATAATTACTCACTCTCAGCCTCAGGTAGAAAAAGTAGAAGAATCAAAAACTGAACATGAGGATAAATCATTGGTTCCTTGGGAAAACAATACTCTTTGGACTGCATGTCCGTACTGTTATTACATGTATGAGTACCCTAGGGTTTATGAGGGTTGTAGTTTGAGGTGCCAAAATTGTGAGAGGACATTTCATGGTGTTGCACTTCCTTCATTGCCACCACTTGTGCCTGGAAGAGAGGCTTATTATTGTACATGGGGTTTTTTCCCTATGGGTTTTGTGTTTGGAACTCCAAATTTCAACACAAAAAGACCTTTGCAGATGTTGGACTCTACCGAGTTTCCGAGTTGGAATCCACCTCCACAAGGCCAGCCTCAACCACTACCACCACAGTCGTAA 792 0.4066 MKDESRRAEAERLLGIAEDFLKNRDLNGSRDFAILAQEIEPLVEGSDQVLAIVDVISAAHKPLNGSIEWYTILQVDLLCQDIDLIKRNYRRLALFLHPDKNYFTLADFAFKLVSDAWEHLSDPIKKAEYDYNIITHSQPQVEKVEESKTEHEDKSLVPWENNTLWTACPYCYYMYEYPRVYEGCSLRCQNCERTFHGVALPSLPPLVPGREAYYCTWGFFPMGFVFGTPNFNTKRPLQMLDSTEFPSWNPPPQGQPQPLPPQS* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1380 263 CDD DnaJ 68 122 IPR001623 -
Lan20g1380 263 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Lan20g1380 263 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
Lan20g1380 263 Pfam DnaJ domain 68 130 IPR001623 -
Lan20g1380 263 SMART dnaj_3 67 125 IPR001623 -
Lan20g1380 263 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 255 - -
Lan20g1380 263 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 255 - -
Lan20g1380 263 MobiDBLite consensus disorder prediction 242 263 - -
Lan20g1380 263 Gene3D DnaJ domain 57 155 IPR036869 -
Lan20g1380 263 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Lan20g1380 263 MobiDBLite consensus disorder prediction 249 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1380 Lan-Chr20 20512879 20513762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1380 7 251 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 52.381 3.82e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1380 - - lang:109344257 332.413