Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1374 ATGCGTATGAGTTGTAATGGATGCAGGGTCTTAAGAAAAGGTTGTAGTGAAGATTGTAGCATCAGACCTTGTTTGCAATGGATCAAGAACCCAGAGTCACAAGCTAATGCTACTGTTTTTCTTGCCAAGTTTTATGGTCGTACTGGTCTCATGAACCTAATCAACGCTGGTCCTCAACACCTTCGTCCAGCGATTTTTCGGTCATTGTTATACGAAGCATGTGGGAGAATAGTGAACCCAATTTATGGATCTGTGGGTTTATTATGGTCCGGGAGTTGGCAACTATGCCAAGCGGCGGTTGAAGCCGTTTTGAAGGGCGCACCAATCACGCCGATAACATCAGAAGCCGCTGCTAATGGGAGGGGCCCACCACTCAAGGCCTATGACATACGCCATGTGTCAAAGGATGAGAATTCAACCGGTTCGAAACAAGCTCAACGTGTTAAGTCTCGAACCCGGTTCAATCGGACCGGAGTAGAACCTGTTGATGCTGTTGGTGTCAAGCAGAATGGTGACGAGGGTTCTCGTTTGGGTCCAGTTGAACCGGAGTCAGAGGAGGTGGTGAACCGGTCGGCGAGTCATGAGTCGTCGATTAGTCACCAGTCCGAACCGGCCGCGACCGTGGTGGAGGGAGAGAGTAAAGATAATGAGAGTGCGGTTTCGGTGGAAAATTCGATTTTATTTCATGATGAACCGGGGTCAGATGATAAGGCGGGTGGCCGAACCGGTGAGAGTGTTGAAGAGGTTGGTTTAGAATTGACACTTGGGTTTGAACCGGTATCACGTGTGCATCACGTGGTTCCAATGAAGAAGAGAAGGGTTGAGTTCTTTAAAGATTGTAGTGTTGATTTTAATGGAACCTCTTGCAAGATGGAGTTGGGGCTTCAGTATCCGGCTTGA 900 0.4833 MRMSCNGCRVLRKGCSEDCSIRPCLQWIKNPESQANATVFLAKFYGRTGLMNLINAGPQHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAAANGRGPPLKAYDIRHVSKDENSTGSKQAQRVKSRTRFNRTGVEPVDAVGVKQNGDEGSRLGPVEPESEEVVNRSASHESSISHQSEPAATVVEGESKDNESAVSVENSILFHDEPGSDDKAGGRTGESVEEVGLELTLGFEPVSRVHHVVPMKKRRVEFFKDCSVDFNGTSCKMELGLQYPA* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1374 299 MobiDBLite consensus disorder prediction 191 206 - -
Lan20g1374 299 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Lan20g1374 299 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 296 - -
Lan20g1374 299 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 296 - -
Lan20g1374 299 MobiDBLite consensus disorder prediction 133 220 - -
Lan20g1374 299 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Lan20g1374 299 PIRSF AS2 1 297 IPR017414 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1374 Lan-Chr20 20459136 20460745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1374 1 295 AS2 family AT3G02550 58.863 1.11e-110 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan20g1374 LOB 9.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1374 - - gmx:100786490 429.483