Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1364 ATGTACCCTTCTACTTACACTTCCTCAGGCCCTTACCCTTGCTACCCTTCAGCTTCAAATTCATACCCTTTTTTCCCTTTCCTTAACCCTGAAAATGCTTCTTCAAGCAACAACAACAACAACCACACCCTTCTTCATGATCCACTTGTTCATGTTCCCTACAACTTACCAACTCATCATCATATTCATAATACACCTATAATCCAAGAAACACTGACCAATTTGGCTGTTTCTGATGTTGCTGCTACAATGCCGAAACAAGACCCTATTATGAGTGGTGGTGGTGGTGCTCATCATCACTATGGGCTTTCTTCTCTGCTCACAAAGAAACCAGCCAAAAAAGATAGGCACAGTAAGATTTACACCTCTCAGGGCTTGAGGGATCGGAGGGTGAGGCTTTCGATCGAGATCGCACGAAAGTTCTTCGATCTACAAGATATGCTAGGGTTTGACAAAGCAAGCAACACCCTTGAGTGGCTCTTCAACAAATCCAAGAGAGCAATTAAGGAGCTAGCTAGAAGCAAGAAAAACAATGGCAGTGAAGGTGATGCTAATAGCTTCTCCTCATCTTCTGATCGTGAGGACTGTAATGAAGTTGTTTCAGGGATCAATAATGAACAACAAGGTATCACCATTGCTGATAACGATTCAAATGCTTTGAAAGATATGAAGAAGTTGAAAAGGGCACAGAAGGAACCAGCTTGTGTTCGAGCAAAGATGAAGGAGTCAAGGGAAAAAGCAAGAGCAAGAGCAAGGGAAAGGACTAGTAACAAGATGTGTAACACTAACAATAATAATGGGAGGGTAGTTCAAGTGCAAGACTTGAAGAAAAAGTGCATTGCAACAAATGAAAACAACACTCATACCCTTCAACAATTGAGATCACCTATTCGGCTTGAAGAATGTGCAAGATCACCTAATAATAAGCTTCTTCACCCTCACTTTGTGAGTAGTAGTGAAGTACCTAGAGATGACAACTTCAATGTGATTGAGGAATCCATTGTGATCAGGAGAAAGTTGAAGCCTTCAATGATGTCTTCTTCTCATCATCATCATCACCAGAATCCAATGATCCCAAAGGAAGCAAGTTTCAACAACAACACTGACTACAACACCTTCACCAATTTGTCTCCAAATTGGGATAATGGTGGCAATGGTATTAATGGCAGATCCAACTTTTGTACAATAGCCAGCATGAATCTCTCTACAGGGCTTCAAATCTTTGGAAAGTCTTGGGAGTAG 1242 0.413 MYPSTYTSSGPYPCYPSASNSYPFFPFLNPENASSSNNNNNHTLLHDPLVHVPYNLPTHHHIHNTPIIQETLTNLAVSDVAATMPKQDPIMSGGGGAHHHYGLSSLLTKKPAKKDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKRAIKELARSKKNNGSEGDANSFSSSSDREDCNEVVSGINNEQQGITIADNDSNALKDMKKLKRAQKEPACVRAKMKESREKARARARERTSNKMCNTNNNNGRVVQVQDLKKKCIATNENNTHTLQQLRSPIRLEECARSPNNKLLHPHFVSSSEVPRDDNFNVIEESIVIRRKLKPSMMSSSHHHHHQNPMIPKEASFNNNTDYNTFTNLSPNWDNGGNGINGRSNFCTIASMNLSTGLQIFGKSWE* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1364 413 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 20 413 - -
Lan20g1364 413 MobiDBLite consensus disorder prediction 178 195 - -
Lan20g1364 413 ProSiteProfiles R domain profile. 241 258 IPR017888 -
Lan20g1364 413 ProSiteProfiles TCP domain profile. 113 171 IPR017887 -
Lan20g1364 413 Pfam TCP family transcription factor 112 261 IPR017887 -
Lan20g1364 413 MobiDBLite consensus disorder prediction 172 195 - -
Lan20g1364 413 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 413 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1364 Lan-Chr20 20351659 20353710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1364 109 381 TCP Transcription Factor Family AT1G67260 34.247 6.76e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan20g1364 TCP 2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1364 - - lang:109354107 592.808