Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1362 ATGGATCCTCCTGGTCGTGCTATCCCTAAAATACGCCAAGTCGGATTCTTCACTTCCGGAGCTCCACCCGACCCATCTCATTCGGGTCCACCCGACCCGAATCATATTCCTTCTTCGCCCGTTATCATTCCTCCCTCTCGCCACCTCTCCGATAACCTCCTCCTCCACTCTCGCCTTCTTCCTCCGCCGCATTCCTACTCCTCCGCCGCCGCCGATTTCTTTACTTCTCCGTTGTCGTCTGTGCATTTGCCTTCGCCGTTGTCTGCTTCTTATTCTAGTATGATGGCGGCTTCCGGTGAGGGTGGCGCGAAGGGGAATAGTGGTGGTGGAAAGGTTGCTTCGTCGTATCCATGTGGTGGATTTGATTTGAGCACGGCGATGAAGAAGAGTGGTGGTTCGGAAATGAAAGACCAATTAAAACAACAGAAACCGAAAACCTCAAGAGCTGAAAGACGTGCTCTTCAAGAAGCTCAACGAGCTGAAAAAGCTGAAGGAAATAAGGCATATGGAGCTGCTACTTCCGCAAATGCAAAACCAGCTAAAGCTGCAAAACCCGCACAGAAACTTGATAATTCTGCAGCTGCAGCCTCTGAGAAGAAGGCAGGTGATCCACCAGAAAAGGATAGAAAGAAGGATGTTCCTCAACCACGTATGCAGTATGATGACAAGAACAGAGTGGAGAAGGCTAGACGCCGAGCAGTGGTGAAACAAACTGAAGCTAGGAACAGGGTCGAGTTGTTCAGGCATTTACCACAATATGAACATGGTAGTCAGCTTCCAGATCTTGAGGCAAAGTTTTTCCATCTTGATTCTGTGCATCCTGCTGTTTATAAGGTGGGATTGCAGTATCTGCTTGGGGATATATCTTGTGGCAATGATCGTTGTATTGCAATGCTTCAAGCATTTCAAGAGGCCATCAAGGACTATCGGGTTCCACCTGAGAAGACTCTAGTGAGAGACTTAACAGCAAAAATAAGTAGCTATGTTTCATTCCTTATTGAGTGTAGACCTCTTTCAATCAGCATGGGAAATGCAATTAGATTTCTCAAAAGCCGAATAGCCAAGCTACCTTTGGCCCTGTCCGACTCAGAAGCAAAAATTTCTCTTCAGTCAGATATTGAACGTTTTATAAGTGAGAAGATTATACTTGCCAACAAGGTGATAGTCAAGCATGCTGTCACAAAGATAAGAGATGGTGATGTTCTTCTAACTTATGGGTCGTCATTGGCAGTTGAGATGTTACTGTTACATGCACATGAGTTAGGAAAACAATTCCGTGTAGTGGTAGTTGACTCTCGTCCAAAGCTTAGAGGGAAACTTTTGCTTCGCAGGCTTGTGGAGAAAGGTCTTAATTGTACATACACTCATATAAACGCTGTTTCCTACATTATGCATGAAGTTACTCGAGTTTTTCTGGGTGCCGCATCCGTGTTATCCAATGGAACAGTTTATTCAAGTGTTGGGGCGGCATCTGTTGCAATGGTTGCTCACACGTTCCATGTACCTGTCATCGTATGTTGTGAGGCCTATAAATTTCATGAAAGGGTGCAGCTGGATTCAATATGCTCGAATGAACTCGGGGATCCTGATGTCATTTCTAATGTTTCGGGTAGAGGTGATGTCAACTACTTGGATGGCTGGGCCAATATCGAAAATCTGCAACTTTTAAATCTGATTTATGATGCAACACCTTCAGATTATGTTTCAATGATAGTCACAGATTATGGCATGGTTCCTCCTACAAGTGTGCCTGTAGTTGTGAGAGAATATGGAAGAGAACAGGTCTGGATATAA 1794 0.4504 MDPPGRAIPKIRQVGFFTSGAPPDPSHSGPPDPNHIPSSPVIIPPSRHLSDNLLLHSRLLPPPHSYSSAAADFFTSPLSSVHLPSPLSASYSSMMAASGEGGAKGNSGGGKVASSYPCGGFDLSTAMKKSGGSEMKDQLKQQKPKTSRAERRALQEAQRAEKAEGNKAYGAATSANAKPAKAAKPAQKLDNSAAAASEKKAGDPPEKDRKKDVPQPRMQYDDKNRVEKARRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFHLDSVHPAVYKVGLQYLLGDISCGNDRCIAMLQAFQEAIKDYRVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLALSDSEAKISLQSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSLAVEMLLLHAHELGKQFRVVVVDSRPKLRGKLLLRRLVEKGLNCTYTHINAVSYIMHEVTRVFLGAASVLSNGTVYSSVGAASVAMVAHTFHVPVIVCCEAYKFHERVQLDSICSNELGDPDVISNVSGRGDVNYLDGWANIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVVVREYGREQVWI* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1362 597 MobiDBLite consensus disorder prediction 133 163 - -
Lan20g1362 597 MobiDBLite consensus disorder prediction 200 234 - -
Lan20g1362 597 MobiDBLite consensus disorder prediction 24 40 - -
Lan20g1362 597 SUPERFAMILY NagB/RpiA/CoA transferase-like 273 590 IPR037171 -
Lan20g1362 597 MobiDBLite consensus disorder prediction 127 234 - -
Lan20g1362 597 Pfam Initiation factor 2 subunit family 292 580 IPR000649 GO:0044237
Lan20g1362 597 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 8 126 - -
Lan20g1362 597 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 127 597 - -
Lan20g1362 597 MobiDBLite consensus disorder prediction 1 44 - -
Lan20g1362 597 Gene3D - 383 590 IPR042529 -
Lan20g1362 597 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 127 597 - -
Lan20g1362 597 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 8 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1362 Lan-Chr20 20324440 20329597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1362 9 597 Eukaryotic Initiation Factors Gene Family AT5G38640 62.857 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1362 K03680 - gmx:100775998 789.26