Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1345 ATGGAAATGCTAAAAGGAGATGCTGTTATTTGTTTTGTATCATTGTTCTGGTTTTGGAGCTTTGCAAATGCTTTGCTTTCTCCTAAAGGAGTGAACTATGAAGTGCAAGCTTTAATGGGTATAAAAGCTTCTCTAGTGGATCCTCATGGTATTTTAGATGATTGGGATGGTGATGCAGTTGATCCATGTAACTGGAATATGGTGTATTGTTCACCTGAGAACCTTGTCATTAGCCTGGGTACTCCAAGTCAAAGTTTGTCTGGTACTCTATCACCAAGCATAGGAAACTTAACTAACCTTCAGAGTGTGCTGTTACAGAATAACAATATAACTGGACCAATCCCTTCAGAGCTAGGAAAACTTACCATGCTTCATACTCTTGATCTCTCTAATAACTTCTTCAATGGGAAAATTCCTCCCTCTTTGGGTCACTTGAGAAGCCTCCAATACCTGAGACTTAATAATAACAGTTTTGATGGGGAATGCCCAGAGTCACTTGCTAATATGGCACAGCTTGCTTTCCTTGACTTGTCCTACAACAATCTCAGTGGCTCTGTACCCAAAATTTTGGCCAAATCATTCAACATTGTCGGAAACCCCCTCATCTGCAGTACAGGAAAAGAAGCAAACTGCCATGGTTTGACATTGATGCCTATGTCCATGAACTTAAACAACACTAAGAGTAATGCTTTACCTTCCGGCAGACCAAAAGCACAGAAATTGTTCATTGCCCTTGGTTTAAGTCTGGGATGCCTCAGCTTGGTAATTCTTGGCTTTGGACTTGTTATGTGGTGGAGGCACAAGCATAATCAACAGACATTCTTTGATGTGAAAGACAGACATCATGAAGAAGTGTACCTAGGAAACTTGAAGAGGTTCCAATTAAGAGAACTCCAAATTGCTACAAACAACTTCAGCAACAAAAACATATTAGGAAAGGGTGGGTTTGGAATAGTGTACAAAGGAGTTCTCTCAGATGGCATCATTGTAGCAGTCAAGAGGCTTAAAGATGGCAATGCCATTGGTGGAGAGATACAATTTCAGACTGAAGTTGAAATGATAAGCTTAGCAGTGCATAGAAACCTTCTCAGGCTTTATGGATTTTGCATGACCCCAACAGAAAGGCTTTTAGTTTATCCATATATGTCCAACGGCAGTGTTGCTTCTCGTCTTAAGGGTAAGCCAGTTTTGGATTGGGGCACAAGGAAGCAAATTGGGTTAGGAGCAGCTAGGGGACTAATATACCTACATGAACAATGTGATCCAAAGATAATTCATAGAGATGTTAAAGCTGCTAATATATTGCTTGATGATTATTGTGAAGCAGTAGTTGGAGATTTTGGGTTGGCAAAACTTTTAGACCATAAAGATTCACATGTTACAACTGCAGTAAGGGGCACTGTGGGACATATTGCACCTGAGTATCTTTCTACAGGGCAATCTTCTGAGAAAACTGATGTATTTGGATTTGGAATTCTGCTTCTTGAATTGATCACAGGTCATAGAGCTCTAGAGTTTGGAAAGGTTGCTAACCAAAAAGGAGCCATGCTTGATTGGGTGAGGAAAATTCATAAGGATAAGAAGCTTGAACTACTTGTAGACAAGGATCTAAAGAGCAACTATGACCTTATTGAGCTTGAAGAAATTGTTAAAGTGGCTCTATTATGCACACAATATCTTCCAAACCATAGGCCCAAAATGTCTGAAGTTGTAAGAATGCTTGAAGGTGATGGGCTTGCAGAAAAATGGGAAATTTACCCTCAAAGTTCTGATACTACAAATAAGCCCAAACCCAATGAGTTATCTTCATCAGATAGGTATTCTGATCTTACTGATGATTCTTCATTGTTAGTACAGGCCATGGAGCTTTCAGGCCCAAGGTGA 1884 0.3997 MEMLKGDAVICFVSLFWFWSFANALLSPKGVNYEVQALMGIKASLVDPHGILDDWDGDAVDPCNWNMVYCSPENLVISLGTPSQSLSGTLSPSIGNLTNLQSVLLQNNNITGPIPSELGKLTMLHTLDLSNNFFNGKIPPSLGHLRSLQYLRLNNNSFDGECPESLANMAQLAFLDLSYNNLSGSVPKILAKSFNIVGNPLICSTGKEANCHGLTLMPMSMNLNNTKSNALPSGRPKAQKLFIALGLSLGCLSLVILGFGLVMWWRHKHNQQTFFDVKDRHHEEVYLGNLKRFQLRELQIATNNFSNKNILGKGGFGIVYKGVLSDGIIVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKQIGLGAARGLIYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHKDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHRALEFGKVANQKGAMLDWVRKIHKDKKLELLVDKDLKSNYDLIELEEIVKVALLCTQYLPNHRPKMSEVVRMLEGDGLAEKWEIYPQSSDTTNKPKPNELSSSDRYSDLTDDSSLLVQAMELSGPR* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1345 627 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Lan20g1345 627 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 627 - -
Lan20g1345 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Lan20g1345 627 SUPERFAMILY Protein kinase-like (PK-like) 282 575 IPR011009 -
Lan20g1345 627 Gene3D Phosphorylase Kinase; domain 1 274 381 - -
Lan20g1345 627 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Lan20g1345 627 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Lan20g1345 627 Gene3D Transferase(Phosphotransferase) domain 1 382 593 - -
Lan20g1345 627 MobiDBLite consensus disorder prediction 585 614 - -
Lan20g1345 627 ProSiteProfiles Protein kinase domain profile. 305 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1345 627 SMART serkin_6 305 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1345 627 SUPERFAMILY L domain-like 33 307 - -
Lan20g1345 627 Pfam Leucine rich repeat 124 182 IPR001611 GO:0005515
Lan20g1345 627 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 5 627 - -
Lan20g1345 627 Pfam Protein kinase domain 306 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1345 627 MobiDBLite consensus disorder prediction 586 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1345 Lan-Chr20 20144951 20149426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1345 1 627 Receptor kinase-like Gene Family AT5G16000 75.079 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lan20g1345 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1345 - - gmx:100806650 1087.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g1345 20 20144951 20149426 Lan9g0090 9 720612 724102 PCT
Lan20g1345 20 20144951 20149426 Lan8g0140 8 2341371 2345187 PCT
Lan9g0090 9 720612 724102 Lan20g1345 20 20144951 20149426 PCT
Lan8g0140 8 2341371 2345187 Lan20g1345 20 20144951 20149426 PCT