Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1342 ATGCAAGCCACAGATTTTGCAGGACTCAATTATTTACTTCCTTCTCCATACCCTACTAACTACAACACAATTCACAACAACAACATTCCAACATTTCAATTTCCAACATTCCCTAACCAATTATATGGCTTCCACAACAACAACACTCTTCATCAATTTTCTGATCACTTTAGTCCTCAATCATCAGGTATAAGCAGCAACTCCACTTCTGATGAAGCAGATGAGCAAAACCTTGGCCTCATCAATGAGAGGAAACATAGAAGGATGATATCGAATCGAGAATCTGCGCGTCGATCGCGAATGAGGAAGCAAAAACACCTTGATGAGCTATGGTCACAAGTTATGTGGCTAAGGAATGAGAATCACCAACTACTAGACAAGTTGAACCATGTGTCTGAGTGCCATGATCAAGCACTTGAAGAGAATGCTAAGCTTAAAGAACAAACTTCAGAACTTCATCAAATGATAAGGGATATGCAGATAAATAGTTCATGCCCTTCCTTTGAATCATTGGAAGATATTCCTTGA 528 0.392 MQATDFAGLNYLLPSPYPTNYNTIHNNNIPTFQFPTFPNQLYGFHNNNTLHQFSDHFSPQSSGISSNSTSDEADEQNLGLINERKHRRMISNRESARRSRMRKQKHLDELWSQVMWLRNENHQLLDKLNHVSECHDQALEENAKLKEQTSELHQMIRDMQINSSCPSFESLEDIP* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1342 175 PANTHER BZIP TRANSCRIPTION FACTOR 1 171 - -
Lan20g1342 175 MobiDBLite consensus disorder prediction 53 76 - -
Lan20g1342 175 Gene3D - 82 138 - -
Lan20g1342 175 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 133 IPR004827 GO:0003700|GO:0006355
Lan20g1342 175 MobiDBLite consensus disorder prediction 53 78 - -
Lan20g1342 175 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Lan20g1342 175 Pfam bZIP transcription factor 84 137 IPR004827 GO:0003700|GO:0006355
Lan20g1342 175 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Lan20g1342 175 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Lan20g1342 175 SUPERFAMILY Leucine zipper domain 84 133 IPR046347 GO:0003700|GO:0006355
Lan20g1342 175 Coils Coil 135 155 - -
Lan20g1342 175 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 171 IPR044521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1342 Lan-Chr20 20091468 20092289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1342 2 168 bZIP Transcription Factor Family AT3G30530 58.192 2.00e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan20g1342 bZIP_1 1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1342 - - lang:109335342 366.311