Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1329 ATGAAAATAATGTTCTGTTTCTTACCCAACATCCAATGCATGTTCTTCTTCTTTCTACTTTCTTGTACTTTCTTCACTTCAATAACAGAAGCTTATGATCCACTTGACCCAAATGGAAATATCACAATCAAATGGGATGTTATGAGCTGGACAGCTGATGGCTATGTTGCTGTTGTTACGGTGAACAACTTCCAACAATATCGTCATATCTCAGCGCCTGGCTGGTCAATAGGATGGACATGGGCAAAGAAGGAGGTAATATGGTACATGGCGGGAGGGCAGACTACGGAACAAGGGGATTGTTCGAAATTTAAGGGAAACATCCCACATTGCTGTAAAAAGGACCCGACGGTTGTAGATTTACTTCCCGGAACACCTTACAATCAACAAATTGCAAATTGCTGCAAAGGTGGTGTACTCAGCTCATGGGCACAGGATCCGATCAATGCAGTTGCAGCATTTCAACTCAGTGTCGGTAGTGCTGGAACCACGAACAAAACAGTCAAATTGCCGAAAAACTTCACCTTGAAGGCACCGGGACCAGGTTATACTTGTGGGCCAGCGAAGATTGTGACACCAACTCAATTCAGATTAGGAGACAAAAGGAGAGTGACACAAGCATTCATGACATGGAATGTGACGTGCACGTATTCGCAATTTCTAGCTCAGAGGACTCCCACTTGCTGTGTCTCCCTATCATCTTTCTACAATGATACTATAGTACCGTGCCCAACATGTTCATGCGGCTGCCAGGGCAACTCGCCTCAATTGGGAAACTGCATAGATCCAGATTCACCACATTTGGCATCGTCTGTTTCCAACACCGGAAAGAATAGTCTCACACCTTTGGTTCAGTGCACTAGTCATATGTGCCCGATCAGAGTTCACTGGCACATTAAGGTTAACTACAAGAAATTCTGGCGTGTGAAGGTTACTGTTACTAATTTCAATTACAGGATGAACTATTCTGACTGGAACTTGGTTATTAAACACCCGAACTTTGACAACCTGACCGAACCTTTCAGTTTCAACTACAAGTCAATAACTCCCTATGGGACAATAAGTAAGTCTGATCCGTATTTAATCGTTTCAAGAACTTACAATCTTTTGGTTCTTTGA 1119 0.4307 MKIMFCFLPNIQCMFFFFLLSCTFFTSITEAYDPLDPNGNITIKWDVMSWTADGYVAVVTVNNFQQYRHISAPGWSIGWTWAKKEVIWYMAGGQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPINAVAAFQLSVGSAGTTNKTVKLPKNFTLKAPGPGYTCGPAKIVTPTQFRLGDKRRVTQAFMTWNVTCTYSQFLAQRTPTCCVSLSSFYNDTIVPCPTCSCGCQGNSPQLGNCIDPDSPHLASSVSNTGKNSLTPLVQCTSHMCPIRVHWHIKVNYKKFWRVKVTVTNFNYRMNYSDWNLVIKHPNFDNLTEPFSFNYKSITPYGTISKSDPYLIVSRTYNLLVL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1329 372 PANTHER COBRA-LIKE PROTEIN 8 356 - -
Lan20g1329 372 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Lan20g1329 372 PIRSF COBRA 3 371 IPR006918 GO:0010215|GO:0031225
Lan20g1329 372 Pfam COBRA-like protein 55 218 IPR006918 GO:0010215|GO:0031225
Lan20g1329 372 PANTHER PROTEIN COBRA 8 356 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1329 Lan-Chr20 19913624 19916762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1329 4 372 COBRA Gene Family AT3G02210 70.933 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1329 - - gmx:100783820 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0935 8 11096805 11100909 Lan20g1329 20 19913624 19916762 LSH
Lan20g1329 20 19913624 19916762 Lan9g0114 9 1367996 1372147 PCT
Lan9g0113 9 1364768 1367357 Lan20g1329 20 19913624 19916762 PCT