Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1328 ATGAAAATAATGTTCTGTTTCTTACCCAACATCCAATGCATGTTCTTCTTCTTTCTACTTTCTTGTACTTTCTTCACTTCAATAACAGAAGCTTATGATCCACTTGACCCAAATGGAAATATCACAATCAAATGGGATGTTATGAGCTGGACAGCTGATGGCTATGTTGCTGTTGTTACGGTGAACAACTTCCAACAATATCGTCATATCTCAGCGCCTGGCTGGTCAATAGGATGGACATGGGCAAAGAAGGAGGTAATATGGTACATGGCGGGAGGGCAGACTACGGAACAAGGGGATTGTTCGAAATTTAAGGGAAACATCCCACATTGCTGTAAAAAGGACCCGACGGTTGTAGATTTACTTCCCGGAACACCTTACAATCAACAAATTGCAAATTGCTGCAAAGGTGGTGTACTCAGCTCATGGGCACAGGATCCGATCAATGCAGTTGCAGCATTTCAACTCAGTGTCGGTAGTGCTGGAACCACGAACAAAACAGTCAAATTGCCGAAAAACTTCACCTTGAAGGCACCGGGACCAGGTTATACTTGTGGGCCAGCGAAGATTGTGACACCAACTCAATTCAGATTAGGAGACAAAAGGAGAGTGACACAAGCATTCATGACATGGAATGTGACGTGCACGTATTCGCAATTTCTAGCTCAGAGGACTCCCACTTGCTGTGTCTCCCTATCATCTTTCTACAATGATACTATAGTACCGTGCCCAACATGTTCATGCGGCTGCCAGGGCAACTCGCCTCAATTGGGAAACTGCATAGATCCAGATTCACCACATTTGGCATCGTCTGTTTCCAACACCGGAAAGAATAGTCTCACACCTTTGGTTCAGTGCACTAGTCATATGTGCCCGATCAGAGTTCACTGGCACATTAAGGTTAACTACAAGAAATTCTGGCGTGTGAAGGTTACTGTTACTAATTTCAATTACAGGATGAACTATTCTGACTGGAACTTGGTTATTAAACACCCGAACTTTGACAACCTGACCGAACCTTTCAGTTTCAACTACAAGTCAATAACTCCCTATGGGACAATAAATGATACAGCAATGCTTTGGGGAATTAAGTTCTACAATGATTTTCTCATGCAAGCTGGCCCTATTGGCAATGTACAATCGGAGCTACTTTTTCGAAAGGATAAATCAACTTTTACTTTTGAGAAGGGTTGGGCTTTTCCAACAAGGATCTATTTCAATGGTGACAACTGTGTGATGCCACCACCCGATGCTTATCCATGGTTACCTAACACCGGTTCTCGGCAAGAGCCTTCACTGCTTGCTATGGTGATGGTTTCCTTGGTAGCCTTGTTATTTGAAGCATATGCTTAA 1353 0.4331 MKIMFCFLPNIQCMFFFFLLSCTFFTSITEAYDPLDPNGNITIKWDVMSWTADGYVAVVTVNNFQQYRHISAPGWSIGWTWAKKEVIWYMAGGQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPINAVAAFQLSVGSAGTTNKTVKLPKNFTLKAPGPGYTCGPAKIVTPTQFRLGDKRRVTQAFMTWNVTCTYSQFLAQRTPTCCVSLSSFYNDTIVPCPTCSCGCQGNSPQLGNCIDPDSPHLASSVSNTGKNSLTPLVQCTSHMCPIRVHWHIKVNYKKFWRVKVTVTNFNYRMNYSDWNLVIKHPNFDNLTEPFSFNYKSITPYGTINDTAMLWGIKFYNDFLMQAGPIGNVQSELLFRKDKSTFTFEKGWAFPTRIYFNGDNCVMPPPDAYPWLPNTGSRQEPSLLAMVMVSLVALLFEAYA* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1328 450 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Lan20g1328 450 PANTHER COBRA-LIKE PROTEIN 8 448 - -
Lan20g1328 450 PANTHER PROTEIN COBRA 8 448 IPR006918 GO:0010215|GO:0031225
Lan20g1328 450 PIRSF COBRA 3 450 IPR006918 GO:0010215|GO:0031225
Lan20g1328 450 Pfam COBRA-like protein 55 218 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1328 Lan-Chr20 19906044 19909980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1328 4 445 COBRA Gene Family AT3G02210 73.497 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1328 - - gmx:100783820 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0934 8 11093995 11096510 Lan20g1328 20 19906044 19909980 LSH
Lan9g0114 9 1367996 1372147 Lan20g1328 20 19906044 19909980 PCT