Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1325 ATGGGTTTGTTCATAGCAATTTTTGGTTTAGTCTTGGTGTTCTGTTTTTGCTCTGCACTTTTGAGGTGGAATGAAGTAAGATACAGCAAAAAAGGTTTGCCTCCTGGCACAATGGGTTGGCCACTTTTTGGTGAAACTACTGAGTTTCTTAAACAAGGTCCAAACTTCTTGAAAACTCAGAGAGCAAGGTATGGCAGTTTTTTCAAATCACACATATTGGGGTGTCCTACCATTGTATCCATGGATCCAGAGCTTAATAGATATATCCTAATGAATGAATCAAAAGGACTTGTTCCTGGATACCCTAAATCCATGTTAGATATCTTAGGGAAATGTAATATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGGGCATTACTTTCTCTCATTAGCCCCACTTTGATCAAAGATCAACTTTTGCCAAAAATTGATGACTTTATGAGAGCCCACCTAAGCAATTGGGAGAACAAAGTCATCAACATTCAACATAAAACTAAAGAGATGGCATTCCTCTCAACTTTGAAGCAAATTGCCGGTATGGAATCAAGTTCAATATGTAACTCATTTATGACAGAGTTCTTTAAGCTAGTTCTAGGAACTCTTTCCCTCCCTATAGACCTTCCTGCGACAAATTATCGCCGCGGATTCCAGGCAAGGAAGAACATTGTCAACATTGTGAGTAAGATATTAGAGGAAAGAAGAGCATCCAATGAAAGTTACCAAGACATGCTTGGTTCATTGATGGCAAAAGATGAATGTAAATACAAACTAAGTGATGAAGAAATTATTGATCTAGTGATTACACTTATATATTCTGGCTATGAAACTGTTTCAACTACATCAATGATGGCAGTGAAATATCTACATGACCATCCCAAAGCTCTTGAAGAACTTAGAAAAGAGCATTTGGCAATAAGAGAAAGTAAAAATTCAAATGACCCAATTGATTATAATGATCTCAAATCAATGAAGTTTACTCGTGCGGTGATTTTTGAGACCTCTAGATTGGCCACAATAGTTAATGGGGTTCTAAGGAAAACCACTCAAGACATGGAACTAAATGGATATTTGATTCCCAAAGGGTGGAGAATATATGTGTATACAAGAGAAATAAATTATGACCCATTTCTCTATCCTAATCCATTAATATTCAACCCATGGAGATGGCTGGACAAGAGTTTAGAGTCACAAAATTATTTCTTGATATTTGGAGGAGGTACTAGACTTTGTCCAGGAAAAGAGTTGGCAATAGCTGAAATTTCAACTTTTTTACATTACTTTGTAACTAGATACAGGTGGGAAGAAGTAGGAGGAGATAAACTAATGAAATTTCCTAGAGTTCAAGCACCAAATGGACTACACATAAGGGTGTCATCTCTTAATAATAATTTACTTGGGAAGGGACTATATGTATAG 1425 0.3677 MGLFIAIFGLVLVFCFCSALLRWNEVRYSKKGLPPGTMGWPLFGETTEFLKQGPNFLKTQRARYGSFFKSHILGCPTIVSMDPELNRYILMNESKGLVPGYPKSMLDILGKCNIAAVHGSTHKYMRGALLSLISPTLIKDQLLPKIDDFMRAHLSNWENKVINIQHKTKEMAFLSTLKQIAGMESSSICNSFMTEFFKLVLGTLSLPIDLPATNYRRGFQARKNIVNIVSKILEERRASNESYQDMLGSLMAKDECKYKLSDEEIIDLVITLIYSGYETVSTTSMMAVKYLHDHPKALEELRKEHLAIRESKNSNDPIDYNDLKSMKFTRAVIFETSRLATIVNGVLRKTTQDMELNGYLIPKGWRIYVYTREINYDPFLYPNPLIFNPWRWLDKSLESQNYFLIFGGGTRLCPGKELAIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVQAPNGLHIRVSSLNNNLLGKGLYV* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1325 474 SUPERFAMILY Cytochrome P450 27 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan20g1325 474 Gene3D Cytochrome P450 24 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan20g1325 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
Lan20g1325 474 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan20g1325 474 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan20g1325 474 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan20g1325 474 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan20g1325 474 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan20g1325 474 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan20g1325 474 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan20g1325 474 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan20g1325 474 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan20g1325 474 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan20g1325 474 PANTHER CYTOCHROME P450 26 7 461 - -
Lan20g1325 474 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 461 - -
Lan20g1325 474 Pfam Cytochrome P450 34 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1325 Lan-Chr20 19856711 19860414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1325 81 461 Cytochrome P450 AT5G38970 70.419 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1325 K09590 - gmx:100805958 835.099