Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1311 ATGTCTAAGAAAGTTTTGAAAACCATGAAGGATGAAAATTCAGATTTGCAGAAGCAGATTGGGTGCATTAGTGGATTCTTTCAGTTGTTTGACCGCAACAGGTTCCTCACAGAACAAAGCACTGGCTGCACCCAGAGTCAGAATAGACCTGCACTAGGGCCAGGTGGAACTAGTGATCACATCAAAGAGAAAAATAATACAATGCAAAAAGCACCGGCAAATAATGTAATGGTTGCAAAAGAGATTCAACAATTCTCAACAGAATCATCAGGAACATCAATCTCTTCATCATCTTGTTCATCAAGCATGTCATCCCTCGAGTTTAACCGAACAATTCAGATAGAACAACCATCAATTATTCCAATCAAAGTTGCAGAAAATTTCAATGCAGCTGCAGCAATAAAGCAACTTGATTTCTATGATGTTGTCAAAGGCTCAATGCATAGAGAATCCAAAGGATTGGCAGTGAAAACTGCGGCTGTAGACGAAAAGAAACGCCGAGTCTTGAAATTCATAGACTCTCCGAGGCCTTTGCAGCCACACAAATCTGTCAATAGACCTTTGGATTCACCAAGGCTCTCTTATGATGGCAGGGATATGCATGATTCATTCAAATCTTCTACAAAGCACAAGGAACTACCAAGGCTTTCTTTGGATAGTAGACAAGGATCCTTTAATGGTGTCAATGAAGGAACAAAATCTAGCAACCTTTTGAAGGGTCCAAACAAAGGGTATGGAGGCACTAGCACAATGGTTAAACAGCTGCAAGAATCCGAAACTCGTAAAAGATCATCATCATCTAGTGTTGTAGCTAAGTTAATGGGACTAGAAGGCTTCGTGGGCACGACGCAAAGTTCTGTATCGCCGAGGACAACGAATGGAAGCCAAGATTCTCAATTGCAGGCATCCAAGGGAAGTGATTCTTCAATAAAAGCCTCAAATCCTGTCCTATCGGTATATGGGGAAATCGAGAAAAGGATGGCTAATCTTGAGTTCAAAAATTCGGGAAAGGATCTTAGAGCGCTTAAACAGATTCTTGACGCAATGCAAAGATATAAAGATACATTAGATATAACAAGAGATAATGCTTCAAATTCTCCATGTCATAGTAGGAGTAATAGTAGTTTCAGTGAAAGCTCCAAAGTACATAGCCCAAGAATAAGACAGAAGGAACCAACATTTACCACAGCCGAGAAGTCTAATCCGAACAATGTTAGTAAATCGCCAATTGTGATCATGAAACCAGCAAAAGTTACTAGAGAAACCAATAATCTTGTTAACAACACAAATGGAAGATTGTTTGACAAGCGTGATGGGCAAAAATCAAATGGCATGAGTCCAAAAAGCAGACATAACAAGGATTCTTTTAGTGAACCCTTTCATTCAGCAGATAAGAGTAATAAGATGAGAACTTCAAAATTGATGCAATCCTCAAAAGTTTCACAAGCCATCAATGGAGTAAACACCATCAACTCAAGCAATACAGCAGAGACAAGGAGCCCGAGAATACAAAAGAAGTTTGGTTTCGGGAGGCGTTCGCCATCAACTAGTCCATCACCGGATTCCATCAGTAACAGAAGACAACACAATAGGCAATCAATGGAATTGAATTCCCCAAGTACATCACCTAGACAAAAATTCTCTACTTTGCACGAAAGAAATAACCGTTTCAGCGAGCTCAGATATCAAAGGAGGGATTTTAAGCATGAAGTTGATATTATATCTCAAGATTTTGACATCAAAAGAAGCATGGACTCTCACAGTGACATAGTAGTCACTCATGTTGATCATTCTGAAAAGAGCAATACCACCTTCATCCATCCGAATAGCCCGAATCTAAATAATGCAACGAAAGAGTTGAGCAACGATAGCTTTATGGCCGAGAAAATAGTTACTGCAGAACAACCTAGTCCTGTGTCTGTTCTTGATGCAACATTCTATATAGAAGATCCACCTTCTCCAGTGAAAAAGAAACCAGACATCTCAAAAGATTTAGGTGAAGCTTTAAATGCTTATGATAGTAGCGAGGAGAACTCGGAAGATCTTCAACAAATTCACTACAATAATGAGAAATTACCGAATATCAGTGACATTAAGGACCCTGATCATAAATACATATCAGAAATACTGTTAGTGTCAGGGCTGCTAAGCAGTGCTGGCTATAGCCAGGCAGTTAACTCATCAGCGCACCCGATTAACCCGAAGATATTCCTTGCACTAGAGCAAATGAAGACGAGCAAGTTGCATTTCAATAATCCTGAGAAAATGCAAAGGAAACTCATATTTGATGTTGTGAATGACATTCTAGTTGAAAAGCTGATATTGGAGAGTTCATCCACACTGTGGAGCTTTCCGAATCTGCCAACAGGACGAAAACTAAAAGGGCAGCGACTTTCAGAAGAGATTTTCGCAGAAATAAATCAGTTACAACATAAAGATAGGAATGTCAGCCTGACTAATGAGGATGAGCATTTGACAAACCTTCTATGGGAAGATTTGATGCATCAATCCACAATTTGCACCGAAACTCGCCGAGAGATACCTAATGTTGTGTTGGATATTGAAAGGTTGATTTTTAAAGATTTGATAACTGAAGTTGTGAGAGGTGAAGTTGCTAACTATCCTGATAGGCATTGCAGGCAAACTTAG 2649 0.3956 MSKKVLKTMKDENSDLQKQIGCISGFFQLFDRNRFLTEQSTGCTQSQNRPALGPGGTSDHIKEKNNTMQKAPANNVMVAKEIQQFSTESSGTSISSSSCSSSMSSLEFNRTIQIEQPSIIPIKVAENFNAAAAIKQLDFYDVVKGSMHRESKGLAVKTAAVDEKKRRVLKFIDSPRPLQPHKSVNRPLDSPRLSYDGRDMHDSFKSSTKHKELPRLSLDSRQGSFNGVNEGTKSSNLLKGPNKGYGGTSTMVKQLQESETRKRSSSSSVVAKLMGLEGFVGTTQSSVSPRTTNGSQDSQLQASKGSDSSIKASNPVLSVYGEIEKRMANLEFKNSGKDLRALKQILDAMQRYKDTLDITRDNASNSPCHSRSNSSFSESSKVHSPRIRQKEPTFTTAEKSNPNNVSKSPIVIMKPAKVTRETNNLVNNTNGRLFDKRDGQKSNGMSPKSRHNKDSFSEPFHSADKSNKMRTSKLMQSSKVSQAINGVNTINSSNTAETRSPRIQKKFGFGRRSPSTSPSPDSISNRRQHNRQSMELNSPSTSPRQKFSTLHERNNRFSELRYQRRDFKHEVDIISQDFDIKRSMDSHSDIVVTHVDHSEKSNTTFIHPNSPNLNNATKELSNDSFMAEKIVTAEQPSPVSVLDATFYIEDPPSPVKKKPDISKDLGEALNAYDSSEENSEDLQQIHYNNEKLPNISDIKDPDHKYISEILLVSGLLSSAGYSQAVNSSAHPINPKIFLALEQMKTSKLHFNNPEKMQRKLIFDVVNDILVEKLILESSSTLWSFPNLPTGRKLKGQRLSEEIFAEINQLQHKDRNVSLTNEDEHLTNLLWEDLMHQSTICTETRREIPNVVLDIERLIFKDLITEVVRGEVANYPDRHCRQT* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1311 882 MobiDBLite consensus disorder prediction 389 407 - -
Lan20g1311 882 MobiDBLite consensus disorder prediction 510 548 - -
Lan20g1311 882 MobiDBLite consensus disorder prediction 282 311 - -
Lan20g1311 882 MobiDBLite consensus disorder prediction 192 217 - -
Lan20g1311 882 PANTHER LONGIFOLIA PROTEIN 682 881 - -
Lan20g1311 882 PANTHER LONGIFOLIA PROTEIN 1 290 - -
Lan20g1311 882 PANTHER LONGIFOLIA PROTEIN 289 683 - -
Lan20g1311 882 PANTHER LONGIFOLIA PROTEIN 682 881 IPR033334 GO:0051513
Lan20g1311 882 PANTHER LONGIFOLIA PROTEIN 289 683 IPR033334 GO:0051513
Lan20g1311 882 PANTHER LONGIFOLIA PROTEIN 1 290 IPR033334 GO:0051513
Lan20g1311 882 MobiDBLite consensus disorder prediction 434 468 - -
Lan20g1311 882 Coils Coil 342 362 - -
Lan20g1311 882 Pfam Domain of unknown function (DUF4378) 702 865 IPR025486 -
Lan20g1311 882 MobiDBLite consensus disorder prediction 174 249 - -
Lan20g1311 882 MobiDBLite consensus disorder prediction 421 553 - -
Lan20g1311 882 MobiDBLite consensus disorder prediction 358 407 - -
Lan20g1311 882 MobiDBLite consensus disorder prediction 219 249 - -
Lan20g1311 882 MobiDBLite consensus disorder prediction 469 501 - -
Lan20g1311 882 MobiDBLite consensus disorder prediction 359 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1311 Lan-Chr20 19655165 19660453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1311 1 875 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.479 4.28e-71 251
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0137 5 1735335 1740356 Lan20g1311 20 19655165 19660453 LSH