Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1310 ATGGGAAAGAACAATGAGAAAAATAAGATGACTAACAGTTCAAAAGAAGCAGATTTTCAATTAAAACAAGAAGGTCTAATCTCAAGTGATCAAGAAAATGCAAAAGCATCATCTGGCTCAGCGCAATGGTTAAGATTAAAAGATCCGAGGATCGTTCGTGTATCTCGCGCCTTCGGAGGTAAGGATAGGCATAGCAAGGTTTTCACAATAAGAGGACTAAGAGACAGGAGAGTAAGGCTTTCAGTCCCCACTGCCATTGACCTATATGATCTTCAAGATAGACTAGGGCTCAATCAACCTAGCAAGGTTGTTGATTGGTTGCTTAATGCAGTTAAGCAAGAAATTGATGAACTTCCACCACTACCCATCTCTCCAAGGAATTTCACCCTCGGTTATCCATCTCTCGCTGCTTCGAATGAAGTTACCACCTCACAGTTTAACATCGGACCGTCTAGTACACGAAACTCTCAGCGAACAGATTCCGAGGAACATCATAAACGAGAAAGCAATGAGTCACATGTTTTGCCAAATAATCTCTTATTACCAAGAGCAAATCAACCTTCCTTCCTTGGCATGCTGAACACTATGCCACTTGGTGGTTACCAATTGCCTTCAGCTGATGTTACTCAATTGGAAAACCATGGATTTGTACACCAACAAGATCATATACATAGCATTAATGTGGTACCTTTTCCATCAACATTGTCTTTATCAACTGGGAATAGTGCTTCTCAAATTTTGGTATGTCCTCCTGGAGTAACAACACAGTCATATTTTCCAGCTTCAAATGTTGCAGCAATAGACATGGATCCAAGACAAATCAACCATTTTCAGATGCTGAGTTCAAGTTCTCATCAAAATCTTTTGATGAATAATTCTCTCAATCCATATCAAAACTTGGTCAGGACTACTCCCAAACTTTTCCATTCATCTAACAGCAGTGAAAGCCAATCACATAAAGACCAGGATTTTCCTTCCGAGTGA 984 0.4004 MGKNNEKNKMTNSSKEADFQLKQEGLISSDQENAKASSGSAQWLRLKDPRIVRVSRAFGGKDRHSKVFTIRGLRDRRVRLSVPTAIDLYDLQDRLGLNQPSKVVDWLLNAVKQEIDELPPLPISPRNFTLGYPSLAASNEVTTSQFNIGPSSTRNSQRTDSEEHHKRESNESHVLPNNLLLPRANQPSFLGMLNTMPLGGYQLPSADVTQLENHGFVHQQDHIHSINVVPFPSTLSLSTGNSASQILVCPPGVTTQSYFPASNVAAIDMDPRQINHFQMLSSSSHQNLLMNNSLNPYQNLVRTTPKLFHSSNSSESQSHKDQDFPSE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1310 327 ProSiteProfiles TCP domain profile. 60 118 IPR017887 -
Lan20g1310 327 MobiDBLite consensus disorder prediction 14 40 - -
Lan20g1310 327 MobiDBLite consensus disorder prediction 308 327 - -
Lan20g1310 327 Pfam TCP family transcription factor 60 170 IPR017887 -
Lan20g1310 327 MobiDBLite consensus disorder prediction 143 178 - -
Lan20g1310 327 MobiDBLite consensus disorder prediction 1 41 - -
Lan20g1310 327 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 10 323 - -
Lan20g1310 327 MobiDBLite consensus disorder prediction 157 172 - -
Lan20g1310 327 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 10 323 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1310 Lan-Chr20 19647396 19649266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1310 22 313 TCP Transcription Factor Family AT3G02150 40.557 7.38e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan20g1310 TCP 3.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1310 - - aprc:113867214 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0923 8 10967675 10969249 Lan20g1310 20 19647396 19649266 LSH