Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1307 ATGGTGGCCAACCTCTTGTTTTTGGAAGCTCCAGCAGGCGTTGGCTTCTCCTACACCAACCAATCCGCTGACTTGCTCGACACCGGCGACCGCCGCACCGCCGAAGATTCTCTAGAATTTGTAATCCAATGGCTGAAGAGATTTCCAAGGTATAAGAATAGGGAACTTTATATAAGTGGAGAAAGCTATGCAGGACATTATGTACCTCAATTGGCAAAAGAGATCTTGAACTATAATGCAAAGGCCAAGTACCACATTAACCTCAAGGGAATAATGGTTGGGAATGCTGTAACAGATAACTATTATGACAACTTGGGGACGTTGAATTACTGGTGGAGCCATGCAATGATCTCAGACCAAACTTATAGGCAACTAATAAGCACATGTGATTTTCACAGCCAAAAGGAATCAGATGAATGTGAATCACTATATACCTATGCCATGGATCAAGAATTTGGTAACATTGATCAGTATAATATCTATGCACCTCCATGCAACCATTCCGATAGTAGCTACTCTTTCACCCGACATGCCATGCGGTTACCTCACCGCCCTCATAAGGCTTTTAGACAATTATCTGGTTATGATCCATGCTCTGAAAAATATGCTGAGATTTATTACAATAGGGTTGATGTTCAGAAAGCACTCCATGCTAACACAACTAAAATTTCTTACAAGTGGACTGCTTGCAGTGAGCTATTGAATCGAAACTGGAATGATACAGAGATATCCATTCTTCCAATTTATAGACAGTTGATTGCTCGTGGAATAAAAATTTGGGTGTTCAGTGGGGACGTTGACTCAGTGGTGCCCGTTACAGCAACTAGATATTCCCTTGAACAACTTAAGTTGGCAACTAAAATACCATGGTACCCTTGGTATGTTAAAAATCAGGTTGGAGGTTGGACAGAAGTGTATGAAGGGTTAACATTTGCTACAGTAAGAGGAGCAGGCCATGAAGTACCACTGTTCAAGCCAAGAGCTGCATTGCAATTATTCAAATCATTTCTTGCAGGAAAGCCTCTTCCTAAGTCCTAA 1038 0.4152 MVANLLFLEAPAGVGFSYTNQSADLLDTGDRRTAEDSLEFVIQWLKRFPRYKNRELYISGESYAGHYVPQLAKEILNYNAKAKYHINLKGIMVGNAVTDNYYDNLGTLNYWWSHAMISDQTYRQLISTCDFHSQKESDECESLYTYAMDQEFGNIDQYNIYAPPCNHSDSSYSFTRHAMRLPHRPHKAFRQLSGYDPCSEKYAEIYYNRVDVQKALHANTTKISYKWTACSELLNRNWNDTEISILPIYRQLIARGIKIWVFSGDVDSVVPVTATRYSLEQLKLATKIPWYPWYVKNQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFLAGKPLPKS* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1307 345 SUPERFAMILY alpha/beta-Hydrolases 2 343 IPR029058 -
Lan20g1307 345 Gene3D - 198 235 - -
Lan20g1307 345 Gene3D - 245 339 - -
Lan20g1307 345 PRINTS Carboxypeptidase C serine protease (S10) family signature 8 18 IPR001563 GO:0004185|GO:0006508
Lan20g1307 345 PRINTS Carboxypeptidase C serine protease (S10) family signature 44 69 IPR001563 GO:0004185|GO:0006508
Lan20g1307 345 PRINTS Carboxypeptidase C serine protease (S10) family signature 309 322 IPR001563 GO:0004185|GO:0006508
Lan20g1307 345 Pfam Serine carboxypeptidase 2 338 IPR001563 GO:0004185|GO:0006508
Lan20g1307 345 ProSitePatterns Serine carboxypeptidases, histidine active site. 309 326 IPR033124 GO:0004185
Lan20g1307 345 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 25 2 344 - -
Lan20g1307 345 ProSitePatterns Serine carboxypeptidases, serine active site. 58 65 IPR018202 GO:0004185
Lan20g1307 345 Gene3D alpha/beta hydrolase 1 167 IPR029058 -
Lan20g1307 345 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 344 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1307 Lan-Chr20 19619049 19626625 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1307 203 342 Calmodulin-binding Proteins AT2G22960 31.206 4.95e-16 73.6