Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1293 ATGCAGAGAAAATTCATGGAGAGTGTACCAAACATGTTGATAATCATTGTAGCATGTACTATGATTCTTGTGATGTTACCAGAAGCTTCTGCTACAAGGTGGACTGTAGGAGGAAACATGGGTTGGAACACAAATTTCAACTATACTACTTGGTCTAAGGGCAAACATTTCTACAAAGATGATTGGCTCTTTTTTGTGTATGATAGGAACCAAATGAATGTGTTAGAGGTGAACAAGACAAACTATGAAAGCTGTAACTCTGATCATCCACTTCATAATTGGACCACTGGTGCTGGAAGAGATGTAGTTCCATTAAATGTGACAAGAAATTATTATTTTATTAGTGGCAAAGGTTTCTGCTATGGTGGCATGAAGATAGCTATTCATGTTGAAAAGTTACCACCTCCTCCTAAAGCATCTCCAATAATATCTGAAGCAACAACAACAACAATTATATCCTCTACTACTCAAATTATTCTCTTGCCTATTGTTTTTGCCATAGGAGCAACATTTGATGCATTTATTAATTTATGGTAA 537 0.3575 MQRKFMESVPNMLIIIVACTMILVMLPEASATRWTVGGNMGWNTNFNYTTWSKGKHFYKDDWLFFVYDRNQMNVLEVNKTNYESCNSDHPLHNWTTGAGRDVVPLNVTRNYYFISGKGFCYGGMKIAIHVEKLPPPPKASPIISEATTTTIISSTTQIILLPIVFAIGATFDAFINLW* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1293 178 Pfam Plastocyanin-like domain 42 124 IPR003245 GO:0009055
Lan20g1293 178 PANTHER BLUE COPPER PROTEIN 11 170 IPR039391 GO:0009055
Lan20g1293 178 Gene3D - 30 133 IPR008972 -
Lan20g1293 178 ProSiteProfiles Phytocyanin domain profile. 32 132 IPR003245 GO:0009055
Lan20g1293 178 SUPERFAMILY Cupredoxins 31 130 IPR008972 -
Lan20g1293 178 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Lan20g1293 178 PANTHER LAMIN-LIKE PROTEIN 11 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1293 Lan-Chr20 19490402 19492544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1293 14 178 Phytocyanin Superfamily AT5G15350 48.810 2.02e-61 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1293 - - mtr:MTR_6g013420 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0913 8 10875757 10886492 Lan20g1293 20 19490402 19492544 LSH