Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1292 ATGGAAAATTTAAGAGTTGATAATAAGATGATGGTAATGGTAATGGTGATTATAGGGTTACTTGCATTGTACCCATTGATGGTGATGGCAGATCCTATTAGGCATAAAGTTGGAGGCAACAAAGGATGGAGTCCAAACGTGAATTACACTGAATGGTCTTCTCATGAACATTTCTTAGTTGGGGATTGGCTATGGTTTATCTTTGACAAACATTACTACAACATTCTTGAAGTGAACAAGACAAGCTATGAAAACTGCATAGACAATGGCTTCATCAAAAACTTGACACGTGGCGGCCGCGATGTGGTTGAGTTGAAAGAGGCAAGGACATACTACTATATCTCTAGTGGAGGATACTGCTTTCATCAAATGAAAGTTGCTGTGAATGTTGAAGAACACCAAGCACCAATAACAGCATCACCACCTCCAATAATGAATAATTCTGGTTCTATTTTGCCTTATGTGTACACATGCACTTTGATCATTGTTGCTAATGTGCTTTTCATGATTTTGGTTTCAATTGGTGCTTTGTAA 534 0.3801 MENLRVDNKMMVMVMVIIGLLALYPLMVMADPIRHKVGGNKGWSPNVNYTEWSSHEHFLVGDWLWFIFDKHYYNILEVNKTSYENCIDNGFIKNLTRGGRDVVELKEARTYYYISSGGYCFHQMKVAVNVEEHQAPITASPPPIMNNSGSILPYVYTCTLIIVANVLFMILVSIGAL* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1292 177 ProSiteProfiles Phytocyanin domain profile. 33 132 IPR003245 GO:0009055
Lan20g1292 177 PANTHER EARLY NODULIN-LIKE PROTEIN 20 13 165 - -
Lan20g1292 177 SUPERFAMILY Cupredoxins 34 130 IPR008972 -
Lan20g1292 177 Gene3D - 33 141 IPR008972 -
Lan20g1292 177 PANTHER BLUE COPPER PROTEIN 13 165 IPR039391 GO:0009055
Lan20g1292 177 Pfam Plastocyanin-like domain 43 117 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1292 Lan-Chr20 19484069 19485924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1292 12 153 Phytocyanin Superfamily AT2G27035 39.860 3.15e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1292 - - gmx:100788336 199.904