Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1277 ATGTTTTCTAGAATGATACATCCACATGAAGGAAATGAAGACATGATGATGCAGTTGCAGGGTGATGGTTCAAACCATAGTAGTTACCTTGGAGACATGTGTGTTGTTTTGACTTCTGATCCAAAACCTCGTCTTCGTTGGACTTCTGACCTTCATAACCGATTTGTTGATGTTGTTACTCAACTTGGGGGTGCTAGTAAAGCCACACCAAAAGCAATTATGCAGACCATGAATGTCAAGGGTTTGACTCTCTATCATCTAAAGAGTCATCTTCAGAAGTACAGGATAGGCAAGCAATCAGGAAAAGATTCCGAAGAGGGATGCAAAGATGGTTCTTATGCTCTAGAAAGCCCTGGAACTGGTAACGCATCTCCAAAGTTACCATCTTCTGATGCAAATGAGGGTCATGAAGTCAAGGAGGCATTAAGGGCACAGATGGAAGTGCAAAGTAAACTACATTTACTAGTGAAGGCAGAGAAGCACTTGCAGGTTCACCAGGATGCAGAGCGGAGATATATGGCCATGCTTGAGAAAGCATGTAAGATGTTGTCCGAACAATTTATCGGTGATACAATTATCAACACAGACAGCCAGAAGCTTCAAGGACAGGAAAATAAAGCATCAAGATTTTCCTTAGTTGACCCCCTTGGCTTTTTCTCCTTACCATCTTCTGAGGTAGCTGGAATGCATCTTTCTGAATTACCATCAACCTTTCAGCCGCAAGGGGCTGACTGTTCAAATGAACTGTGCCTAACGTCACTTGAGAATATCAGCGGGTTGACACTAGAAGGATCATCTCCTGGTGGGATAAGAAAGAGGATGCAAAGCTTGGACTCAATGGTAGCACCTTTGATCTTTAGTGAAGCCAACATAAGAACCCAAGGCATCAATTTAGCTCAAGTCAATCCTTATGGAATAACTAGGTATGGCATGTAG 936 0.4263 MFSRMIHPHEGNEDMMMQLQGDGSNHSSYLGDMCVVLTSDPKPRLRWTSDLHNRFVDVVTQLGGASKATPKAIMQTMNVKGLTLYHLKSHLQKYRIGKQSGKDSEEGCKDGSYALESPGTGNASPKLPSSDANEGHEVKEALRAQMEVQSKLHLLVKAEKHLQVHQDAERRYMAMLEKACKMLSEQFIGDTIINTDSQKLQGQENKASRFSLVDPLGFFSLPSSEVAGMHLSELPSTFQPQGADCSNELCLTSLENISGLTLEGSSPGGIRKRMQSLDSMVAPLIFSEANIRTQGINLAQVNPYGITRYGM* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1277 311 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 311 - -
Lan20g1277 311 Gene3D - 41 99 - -
Lan20g1277 311 MobiDBLite consensus disorder prediction 97 136 - -
Lan20g1277 311 Pfam MYB-CC type transfactor, LHEQLE motif 137 182 IPR025756 -
Lan20g1277 311 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 311 IPR044848 GO:0003700
Lan20g1277 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 99 IPR017930 -
Lan20g1277 311 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 42 97 IPR006447 GO:0003677
Lan20g1277 311 SUPERFAMILY Homeodomain-like 42 97 IPR009057 -
Lan20g1277 311 Pfam Myb-like DNA-binding domain 45 95 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1277 Lan-Chr20 19134893 19139466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1277 22 261 G2-like Transcription Factor Family AT3G24120 45.312 6.41e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lan20g1277 Myb_DNA-binding 4.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1277 - - gmx:100779871 468.388