Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1268 ATGTGTCTTACAACACAGTCTTTTCATAACAATAATCTTCAGAAAATGGAAGCAATGAGAAATGTTACAAGATACATGCAATTAGATCATGTTGTTGAATTGCCACCAGGTTTTCGGTTTCATCCAAATGATCAAGAACTCATAATTTACTACCTCTCTGAGAAGGTTCTTGACAAAAATTTCAGTGCTATAGCCATTGCAGAGGTTGATATGAATAGCTGCGAACCATGGGAATTACCTAGTATGGCGAAAATGGGTGAGAAAGAGTGGTATTTTTTCTGTGTGAGGGACAAGAAATATCCAACAGGTCAAAGGACTAATAGGGCCACTGATGCTGGTTATTGGAAGGCCACAGGAAAAGACAAAGATATATATCAGGGAAAGGCACTAATTGGAATGAAGAAAACTCTGGTTTTCTATAAAGGAAGAGCTCCAAAGGGTGAAAAAACTAACTGGGTCATGCATGAATATAGATTGGATGGAGAAAACTCTATGAATAATCTTTCTAAATCTTCCAAGGAAGAATGGGCTGTTTGTAGAGTTTTTCAAAAGAGTTCTTGTGGAAAGAGAATGCATGGTCCAATGTTGGTAGAACTTTCTCCAATGATTGATTCTCTTCCTATTCCTTACAAGAGTGAAACAAAAAATGTTGTTGGTGAATCATCTTATGTAACAAATGTGACAAATTTCTCTAGTCCAAATCAAAATGAGGATCAAAAGAAACAACATGATATCATAGTTGATAGCTTTGAAGCTCCTATGTTGGCACCACCTTCATATGATTCTGAAATTACCCCTTTCACATGGAACTTTACCAACACTACCACTCCACAATTTGAGAACAATCAAGTTGAGAATAATGCACACAACTCAGGTAGTGGTTTTTTCATGAACCAAGATGAGTCAATTATGAGCATGTTGATTGAAGACCATGGAACAAGTACAATGAAAAACATTAATAATCACAAAGCTAAGGAAAGTGACTTTGATGTGATGTACAACAATGAAATGTTCCAACCATCTTTTGTTGGAAATCAGGGATGTTTATCTGCTTCTTTAGGACATGTAGTCCCTTCTTCTGGGTGCATGTGGAATTTCTAA 1101 0.3642 MCLTTQSFHNNNLQKMEAMRNVTRYMQLDHVVELPPGFRFHPNDQELIIYYLSEKVLDKNFSAIAIAEVDMNSCEPWELPSMAKMGEKEWYFFCVRDKKYPTGQRTNRATDAGYWKATGKDKDIYQGKALIGMKKTLVFYKGRAPKGEKTNWVMHEYRLDGENSMNNLSKSSKEEWAVCRVFQKSSCGKRMHGPMLVELSPMIDSLPIPYKSETKNVVGESSYVTNVTNFSSPNQNEDQKKQHDIIVDSFEAPMLAPPSYDSEITPFTWNFTNTTTPQFENNQVENNAHNSGSGFFMNQDESIMSMLIEDHGTSTMKNINNHKAKESDFDVMYNNEMFQPSFVGNQGCLSASLGHVVPSSGCMWNF* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1268 366 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 29 339 - -
Lan20g1268 366 Pfam No apical meristem (NAM) protein 35 159 IPR003441 GO:0003677|GO:0006355
Lan20g1268 366 ProSiteProfiles NAC domain profile. 34 184 IPR003441 GO:0003677|GO:0006355
Lan20g1268 366 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 29 339 - -
Lan20g1268 366 Gene3D NAC domain 43 188 IPR036093 GO:0003677|GO:0006355
Lan20g1268 366 SUPERFAMILY NAC domain 26 184 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1268 Lan-Chr20 18825278 18827761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1268 32 320 NAC Transcription Factor Family AT5G07680 48.658 1.10e-91 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan20g1268 NAM 2.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1268 - - lang:109347348 524.242