Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1237 ATGTACGGATTCGAAGCTATGACGTTCAACATCCACGGCGGTTACTTAGAGGCCATCGTCCGCGGCCACCGTGCCGGACTCCTCACCACCGCCGACTACAACAACCTCTGTCAATGTGAATCCCTTGACGACATCAAGATGCATCTCTCCGCAACCGATTACGGCTCTTACCTCCAAAACGAACCTTCACCGTTGCATACAACTACAATTGTTGAGAAATGCACTCTGAAGCTTGTTGATGATTACAATCATATGCTGTGCCAAGCCACCGAACCCTTATCCACGTTCCTTCAATACATCACATATGGTCACATGATAGACAATGTTGTTTTGATTGTTACTGGAACCTTGCATGAGAGGGATGTCCAAGAACTGCTAGAAAAATGCCATCCACTGGGCATGTTTGATAGCATTGCCACACTGGCAGTTGCTCAGAATATGCGGGAGCTTTACAGGCTGGTGCTTGTTGACACTCCTCTCGCTCCATACTTCTCTGAGTGCATTACATCAGAGGACTTGGATGACATGAACATAGAAATAATGAGGAATACTCTTTACAAGGCATACCTTGAAGATTTTTACCGATTTTGTCAGAAACTTGGTGGTGCTACCGCTGAGATCATGTCTGACCTTCTAGCCTTTGAGGCTGATAGAAGGGCTGTGAATATTTCAATAAACAGCATTGGTACCGAGCTCACTAGAGATGATCGTAGAAAGCTGTACTCTAATTTTGGTTTACTTTATCCCTATGGACATGAGGAACTTGCTGTTTGCGAGGACATTGATCAGGTCCGTGCTGCTATGGAAAAGTATCCCCCTTACCATTCTATTTTTGCTAAGTTGTCATATGGAGAGAGCCAGATGCTTGACAAGGCGTTCTATGAAGAGGAGGTGAAGAGGCTTTGCTTGGCGTTTGAGCAACAGTTCCATTACGCTGTATTCTTCGCATACATGAGGCTAAGAGAGCAGGAGATCAGGAACCTAATGTGGATTTCAGAATGTGTGGCACAGAACCAGAAGTCTAGAGTTCATGACAGTGTGGTCCTCATATTTTAG 1056 0.4517 MYGFEAMTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCESLDDIKMHLSATDYGSYLQNEPSPLHTTTIVEKCTLKLVDDYNHMLCQATEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNISINSIGTELTRDDRRKLYSNFGLLYPYGHEELAVCEDIDQVRAAMEKYPPYHSIFAKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVLIF* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1237 351 PIRSF V-ATP_synth_D 4 350 IPR016727 GO:0033179|GO:0046961|GO:1902600
Lan20g1237 351 Gene3D - 91 199 IPR035067 -
Lan20g1237 351 Pfam ATP synthase (C/AC39) subunit 16 344 IPR002843 GO:0046961
Lan20g1237 351 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 335 IPR044911 -
Lan20g1237 351 PANTHER V-TYPE PROTON ATPASE SUBUNIT 1 351 - -
Lan20g1237 351 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 351 IPR016727 GO:0033179|GO:0046961|GO:1902600
Lan20g1237 351 Gene3D - 206 309 IPR035067 -
Lan20g1237 351 SUPERFAMILY V-type ATP synthase subunit C 14 348 IPR036079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1237 Lan-Chr20 18091536 18095209 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1237 1 351 Primary Pumps ATPases(2) AT3G28710 93.162 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1237 K02146 - pvy:116145981 694.501