Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1227 ATGGATGAAAATAAAACCTTTACTCTTCATCTTCTCTTTTTCAGCTTCATAACGTTCTGGGTATTGTTGGTTTCTTCTCAGTATGAAGAAGACTATGTTGGATGTCTTAAAGGGATCAAGAACACACTTCACGATCCTCAAAACAATCTCAACTCGTGGCGTTTTGAGAACACCACCGTTGGTTTCATCTGTGAATTTAACGGAGTTTCTTGTTGGAACCAGAGAGAGAATCGTGTTCTTGGGTTGAGTCTCAGAGATTTTGGGTTATCGGGTTCGATCCCAGAATCGCTCAAATACTGTGGTAAGAGTCTTCAAAAATTGGATCTTGGGGCAAACTCTTTGACTTCTCTGATTCCCTCTGAGATCTGTAGTTGGATGCCGTTTTTGGTGTCTTTGGATTTGTCAGATAATAAACTTAGTGGGAAAATTCCACCAACAATTCAGAATTGTTCTTATTTGAATGAGTTGTTGCTTGCAAACAATGATCTTAGTGGTTCTATTCCTTACGAGTTTGGTGGTTTGAGTAGGCTTAAGAAGTTTTCTGTTGCTAATAACAAGCTTAGTGGTACTATTCCTTCCTTTTTTAGTGACTATGGTAAGGAGGATTTTGATGGAAATGATGGGTTGTGTGGGGGTCCTCTTGGATCTAAGTGTGGTGGGTTGAGTAAGAAAAATCTGGCTATTATTATTGCGGCTGGTGTTTTCGGCGCCGCAGCGAGTTTGTTATTGGCTTTTGGGGTTTGGTGGTGGTACCATTTGAGGTTGAGTGGGAGGAGGAAGAGAGGGCATGGTGTTGGAGGTGTAGGTGCAGGTGGTGATGAAAATTGGGCTGTGAAGCTGAAGGGTTTTAAGCTTGTTCAGGTTACTCTTTTTCAGAAGCCTATTGTGAAGGTTAAGTTAGGTGACTTGATGGCTGCTACGAATAACTTTAGTACCGAGAATGTTCTTATTTCGACGAGGACGGGGACTACTTATAAGGCGGATCTTTCAGATGGATCCACGCTTGCGGTGAAGAGGTTGGATACTTGTAAAATTGGGGAGAAGCAGTTTCGGATGGAGATGAACCGGCTGGGACAGGTGAGGCATCCGAATTTGGCGCCGCTTTTGGGGTTCTGTGTTGTGGAGGAAGAGAAGTTTTTGGTTTATAAGCACATGTCGAACGGGACTTTGTATTCGTTGCTGCATAAGAGTGGTGGTGGTTTGGATTGGTTGATGAGGTTCAGGATAGGGCTTGGCACAGCTAGGGGTCTTGCATGGCTGCACCACGGGTGCCATCCTCCGATTATACAACAGAACATTTGTTCCAATGTGATTGTTGTTGATGAAGATTTTGATGCTAGGTTAATGGACTTTGGACTTGCGAGGCTAATGACATCTGACCATGATGGTAGTTTTGTGAATGGGGACTTGGGGGAACTCGGATATATAGCTCCTGAATATCCGAGTACCCTGGTTTCTTCGTTGAAAGGGGATGTATATGGATTTGGGGTCTTGCTTTTGGAGTTGGTTACTGGACGTAAGCCTCTTGAAGTGAGCAATGGTGAGGAAGAGTTTAAGGGTAACTTGGTGGATTGGGTGAATATGCATTCTAGCTCGGGCAGAATCAAGGATTGCATCGATATAGCCATATCTGGGAGGGGACATGATGAGGAGATTCTGCAGTTTCTGAAAGTTGCATTGAATTGTGTGGTTTCTCGCCCCAAGGATAGGTGGTCTATGTACCAGGTTTATCATTCGTTAAAGGCTATATCCAAAGACCACAGTTTCTCTGAACATGATGATGAATTTCCCTTGATCTTTGGCAAGCCAGAAAGTGAGCCAGCGTAG 1827 0.4373 MDENKTFTLHLLFFSFITFWVLLVSSQYEEDYVGCLKGIKNTLHDPQNNLNSWRFENTTVGFICEFNGVSCWNQRENRVLGLSLRDFGLSGSIPESLKYCGKSLQKLDLGANSLTSLIPSEICSWMPFLVSLDLSDNKLSGKIPPTIQNCSYLNELLLANNDLSGSIPYEFGGLSRLKKFSVANNKLSGTIPSFFSDYGKEDFDGNDGLCGGPLGSKCGGLSKKNLAIIIAAGVFGAAASLLLAFGVWWWYHLRLSGRRKRGHGVGGVGAGGDENWAVKLKGFKLVQVTLFQKPIVKVKLGDLMAATNNFSTENVLISTRTGTTYKADLSDGSTLAVKRLDTCKIGEKQFRMEMNRLGQVRHPNLAPLLGFCVVEEEKFLVYKHMSNGTLYSLLHKSGGGLDWLMRFRIGLGTARGLAWLHHGCHPPIIQQNICSNVIVVDEDFDARLMDFGLARLMTSDHDGSFVNGDLGELGYIAPEYPSTLVSSLKGDVYGFGVLLLELVTGRKPLEVSNGEEEFKGNLVDWVNMHSSSGRIKDCIDIAISGRGHDEEILQFLKVALNCVVSRPKDRWSMYQVYHSLKAISKDHSFSEHDDEFPLIFGKPESEPA* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1227 608 ProSiteProfiles Leucine-rich repeat profile. 103 124 IPR001611 GO:0005515
Lan20g1227 608 Gene3D Transferase(Phosphotransferase) domain 1 385 602 - -
Lan20g1227 608 ProSiteProfiles Protein kinase domain profile. 310 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan20g1227 608 SUPERFAMILY Protein kinase-like (PK-like) 288 580 IPR011009 -
Lan20g1227 608 Gene3D Ribonuclease Inhibitor 33 220 IPR032675 -
Lan20g1227 608 PANTHER - 10 601 - -
Lan20g1227 608 PANTHER OS07G0107800 PROTEIN-RELATED 10 601 - -
Lan20g1227 608 SUPERFAMILY L domain-like 31 200 - -
Lan20g1227 608 Pfam Protein tyrosine and serine/threonine kinase 325 513 IPR001245 GO:0004672|GO:0006468
Lan20g1227 608 Pfam Leucine Rich Repeat 129 150 IPR001611 GO:0005515
Lan20g1227 608 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Lan20g1227 608 Gene3D Phosphorylase Kinase; domain 1 272 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1227 Lan-Chr20 17920317 17922655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1227 9 606 Receptor kinase-like Gene Family AT3G28450 63.411 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lan20g1227 PK_Tyr_Ser-Thr 2.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1227 - - lang:109347314 1012.68