Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g1204 ATGGATAGAAGGTTATGCCACAGAGATTTGGTACCCTTTGTGGTACTTGTGGCTAATGAATGCACCAACACTGCCTTATTCACTCTCTTCAAAGCAGCTACAACCAAAGGAATGAGTGACCATGTTTTTGTTGCATATGCTTATGCTGTTGCTACTATTCTACTCCTTCCAATATCTTTTTTCTATAGAAGATCAAGAGTTGTTAATCCTCCACTGAGTTTTTCTATCCTATACAAAATTGCTATTCTTGGAGTTATAGGATGTTCATCTCAGATATTGGGATATGCAGGCATCAAATACAGTTCTCCAACACTTTCTTCTGCAATCAGTAACCTTGTTCCAGCTTTCACCTTCATACTTGCTGTCATTTGCAGGATGGAAAAGATAGTTTTGCAAACTAGAACTACACAAGCTAAGATTTTGGGCAGCATTATATCAGTATTAGGTGCATTTGTAGTGACTTTCTACAAAGGCCCATCAATCATTATTGGTGATGCTTCTTCTTCATTTCAACTTCAACAATCAAATGTCATTCTTGATCCATTGGATATAAATTGGATCATTGGAGCCTTTCTGCTAACAGCTTGCAATATACTACTTACACTATGGTTAATTGTACAGGTAGAGATTTTGAAGGAGTTCCCTGATGAAATAACTATGGTCTTCTTTTACAACTTCTATGCTGCCATAGTAGCAGCAATTGTAGGCTTATTAGCAGAGAGAAATAGCAGTGCTTGGAAAATAAGACTAGATATATCACTCATCTCTATTGTTTGCACCGGAATATTCAATAAGTTCTTGAGCAGTACAATATATGCATGGGGAGTACACTTAAAAGGGCCTGTATATGTAGCAATGTTCAAGCCACTCTCAATTATTATTGCTGTTATAATGGGTGTTATGTTACTTGGTGATATTCTTCATATTGGAAGCATAATTGGAGCCATAATAATATCAATTGGGTTTTATACTGTAATGTGGGGCAAAGCAACAGAAGAGAAGGAGGAAGATGTTGATAACCTACAAGAATCACCAACTACTGAAAATGTTCCTCTTTTGCAAAGCTATGAAAATGTAAATTCTGACAAGAAAATAGATGGAAATGTATAA 1110 0.3613 MDRRLCHRDLVPFVVLVANECTNTALFTLFKAATTKGMSDHVFVAYAYAVATILLLPISFFYRRSRVVNPPLSFSILYKIAILGVIGCSSQILGYAGIKYSSPTLSSAISNLVPAFTFILAVICRMEKIVLQTRTTQAKILGSIISVLGAFVVTFYKGPSIIIGDASSSFQLQQSNVILDPLDINWIIGAFLLTACNILLTLWLIVQVEILKEFPDEITMVFFYNFYAAIVAAIVGLLAERNSSAWKIRLDISLISIVCTGIFNKFLSSTIYAWGVHLKGPVYVAMFKPLSIIIAVIMGVMLLGDILHIGSIIGAIIISIGFYTVMWGKATEEKEEDVDNLQESPTTENVPLLQSYENVNSDKKIDGNV* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g1204 369 PANTHER WAT1-RELATED PROTEIN 8 354 - -
Lan20g1204 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 330 - -
Lan20g1204 369 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020|GO:0016021
Lan20g1204 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
Lan20g1204 369 PANTHER WAT1-RELATED PROTEIN 8 354 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g1204 Lan-Chr20 17540643 17544641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan20g1204 1 358 Nodulin-like Gene Family AT3G28050 48.919 2.66e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g1204 - - gmx:100811686 549.28